Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AL161670.1-201ENST00000554348 137 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 ACTR3BP3-201ENST00000565577 979 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 MIR3935-201ENST00000583472 104 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 RN7SL622P-201ENST00000585292 275 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 AC068831.7-201ENST00000616954 363 ntBASIC1.4□□□□□ -2.19
ABCA1O95477 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
ABCA1O95477 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.4□□□□□ -2.19
ABCA1O95477 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.39□□□□□ -2.19
ABCA1O95477 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ABCA1O95477 ZNF355P-201ENST00000427301 3216 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ABCA1O95477 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ABCA1O95477 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.39□□□□□ -2.19
ABCA1O95477 RNY1-201ENST00000364228 113 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 RNU1-109P-201ENST00000383960 147 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 AC004965.1-201ENST00000413033 213 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 TATDN1P1-201ENST00000414123 891 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.39□□□□□ -2.19
ABCA1O95477 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 snoU13.3-201ENST00000459441 104 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 HMGB1P46-201ENST00000520062 610 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 AP001804.3-201ENST00000525146 880 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 MIR4419B-201ENST00000577260 68 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.39□□□□□ -2.19
ABCA1O95477 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.39□□□□□ -2.19
ABCA1O95477 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.39□□□□□ -2.19
ABCA1O95477 AL355810.1-201ENST00000614629 552 ntBASIC1.39□□□□□ -2.19
ABCA1O95477 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.39□□□□□ -2.19
ABCA1O95477 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ABCA1O95477 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
ABCA1O95477 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.39□□□□□ -2.19
ABCA1O95477 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.39□□□□□ -2.19
ABCA1O95477 RPL17P12-201ENST00000413391 526 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 BX682237.1-201ENST00000415016 335 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 RPS3AP9-201ENST00000417027 792 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA1O95477 NDUFA5P10-201ENST00000432147 357 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.38□□□□□ -2.19
ABCA1O95477 SSXP4-201ENST00000451349 245 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 SNORA31.20-201ENST00000517111 133 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA1O95477 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.38□□□□□ -2.19
ABCA1O95477 MIR5694-201ENST00000581190 76 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 AC245884.12-201ENST00000615364 59 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA1O95477 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA1O95477 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
ABCA1O95477 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA1O95477 MIRLET7G-201ENST00000362280 84 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 Y_RNA.354-201ENST00000365448 111 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 RNU6-1197P-201ENST00000391183 107 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCA1O95477 TMEM167AP1-201ENST00000423409 219 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 RPL7P37-201ENST00000425095 738 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 RPS15AP7-201ENST00000439294 405 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCA1O95477 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA1O95477 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCA1O95477 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.38□□□□□ -2.19
ABCA1O95477 AL731537.2-201ENST00000561565 951 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.38□□□□□ -2.19
ABCA1O95477 AL133507.1-201ENST00000605269 557 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA1O95477 AC007275.1-201ENST00000621243 671 ntBASIC1.38□□□□□ -2.19
ABCA1O95477 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
ABCA1O95477 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.38□□□□□ -2.19
ABCA1O95477 Y_RNA.205-201ENST00000364128 113 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AL035405.1-201ENST00000400795 710 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.37□□□□□ -2.19
ABCA1O95477 AC010625.1-201ENST00000511296 403 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AC008562.1-201ENST00000521763 330 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA1O95477 POLR2KP1-201ENST00000553226 168 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA1O95477 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.37□□□□□ -2.19
ABCA1O95477 AC113194.1-201ENST00000606037 500 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA1O95477 BX649567.1-201ENST00000642071 1134 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
ABCA1O95477 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
ABCA1O95477 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ABCA1O95477 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA1O95477 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ABCA1O95477 RNA5SP252-201ENST00000391131 119 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 RNU6-193P-201ENST00000410977 107 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 GTF2IP7-202ENST00000436677 309 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.37□□□□□ -2.19
ABCA1O95477 RPL21P131-201ENST00000497298 483 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AIG1P1-201ENST00000503376 148 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AC117525.1-201ENST00000515228 503 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 SNORA31.8-201ENST00000516327 108 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 AL049870.4-201ENST00000555741 486 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 WISP1-OT1-201ENST00000602893 642 ntBASIC1.37□□□□□ -2.19
ABCA1O95477 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ABCA1O95477 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
ABCA1O95477 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA1O95477 AC007256.1-201ENST00000392253 2765 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms