Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-797P-201ENST00000363101 109 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RNA5SP387-201ENST00000364226 106 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS4BO75351 RNU6-432P-201ENST00000384196 109 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 MIR3074-201ENST00000384885 81 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 MIR454-201ENST00000390180 115 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RNU6ATAC-201ENST00000408749 126 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RN7SKP159-201ENST00000410657 292 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RNA5SP107-201ENST00000411358 122 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 OR9R1P-201ENST00000412200 877 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 MTCO3P12-201ENST00000416718 547 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS4BO75351 AC099677.1-201ENST00000420575 175 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS4BO75351 RPL23AP83-201ENST00000434984 473 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 USP9YP8-201ENST00000441913 500 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 SNRPGP6-201ENST00000451124 220 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS4BO75351 GMFBP1-201ENST00000467831 427 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RPS29P19-201ENST00000479709 171 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 AC091951.2-201ENST00000500762 203 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 MTCO2P30-201ENST00000503662 364 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC114797.1-201ENST00000514003 728 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC046134.1-201ENST00000514454 666 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RNU6-875P-201ENST00000516488 106 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 RNU7-51P-201ENST00000516560 62 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 IGKV2-38-201ENST00000517443 247 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS4BO75351 OR4R3P-201ENST00000525084 838 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS4BO75351 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS4BO75351 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 AC018630.1-201ENST00000541376 925 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 ARL2BPP2-201ENST00000550907 489 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 OR4K8P-201ENST00000578842 1048 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS4BO75351 FGF7P1-201ENST00000582820 288 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 UBE2V2P2-201ENST00000587677 504 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC010591.1-201ENST00000603941 649 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AL354984.3-201ENST00000604803 325 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AL121992.2-201ENST00000606262 256 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC009994.1-201ENST00000606889 253 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 AC069234.5-201ENST00000611056 416 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AP001486.3-201ENST00000615334 372 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC009033.1-201ENST00000624279 431 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AL136313.1-201ENST00000624804 202 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 AC099654.5-201ENST00000636479 350 ntBASIC4.07□□□□□ -1.76
VPS4BO75351 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS4BO75351 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS4BO75351 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS4BO75351 LINC02471-203ENST00000641941 4752 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS4BO75351 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS4BO75351 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS4BO75351 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS4BO75351 AC018555.1-201ENST00000567548 1980 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS4BO75351 AL139276.1-201ENST00000311910 1001 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 MIR331-201ENST00000362302 94 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 Y_RNA.160-201ENST00000363677 92 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 SNORD46.1-201ENST00000364139 104 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 Y_RNA.255-201ENST00000364581 97 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 Y_RNA.333-201ENST00000365274 102 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 RNU5E-6P-201ENST00000365574 115 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS4BO75351 AL136116.1-201ENST00000403591 381 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 RNU4-65P-201ENST00000410473 140 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 CYCSP19-201ENST00000411715 316 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS4BO75351 AL137014.1-201ENST00000420490 1226 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AL157831.1-201ENST00000426134 473 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS4BO75351 AL117339.2-201ENST00000430475 180 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 MTATP6P16-201ENST00000434543 526 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AC007389.2-201ENST00000434630 306 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 RPL36AP6-201ENST00000435770 321 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AC098614.3-201ENST00000438957 440 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS4BO75351 BNIP3P2-201ENST00000441221 577 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS4BO75351 RNU7-63P-201ENST00000459054 62 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AC233702.1-201ENST00000482905 502 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AL163973.1-201ENST00000484753 577 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS4BO75351 HMGN1P12-201ENST00000499125 195 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AC008628.2-201ENST00000502605 298 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS4BO75351 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS4BO75351 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS4BO75351 RNU6-507P-201ENST00000516045 100 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 SNORD60.2-201ENST00000516883 86 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 HMGN1P28-201ENST00000521340 364 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 OR5B19P-201ENST00000531766 928 ntBASIC4.06□□□□□ -1.76
VPS4BO75351 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms