Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC022616.6-201ENST00000520479 119 ntBASIC3.11□□□□□ -1.91
SNX3O60493 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX3O60493 AP001804.3-201ENST00000525146 880 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX3O60493 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX3O60493 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX3O60493 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX3O60493 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.11□□□□□ -1.91
SNX3O60493 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX3O60493 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX3O60493 Z94722.1-201ENST00000604328 474 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC239868.4-201ENST00000608318 671 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AP000254.1-201ENST00000609934 520 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX3O60493 MIR6758-201ENST00000620653 63 ntBASIC3.11□□□□□ -1.91
SNX3O60493 AC025048.6-202ENST00000627667 438 ntBASIC3.11□□□□□ -1.91
SNX3O60493 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX3O60493 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX3O60493 AC108206.1-201ENST00000570186 4159 ntBASIC3.11□□□□□ -1.91
SNX3O60493 ZNF807-201ENST00000328088 1707 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 OR4G2P-202ENST00000641004 1759 ntBASIC3.1□□□□□ -1.91
SNX3O60493 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SNX3O60493 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
SNX3O60493 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 RNU6-223P-201ENST00000362830 107 ntBASIC3.1□□□□□ -1.91
SNX3O60493 RNU5A-8P-201ENST00000364102 114 ntBASIC3.1□□□□□ -1.91
SNX3O60493 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX3O60493 MIR514A1-201ENST00000385133 98 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AL590004.2-201ENST00000404787 371 ntBASIC3.1□□□□□ -1.91
SNX3O60493 RN7SKP159-201ENST00000410657 292 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX3O60493 RPL27AP8-201ENST00000424277 446 ntBASIC3.1□□□□□ -1.91
SNX3O60493 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX3O60493 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX3O60493 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX3O60493 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX3O60493 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX3O60493 TIMM9P1-201ENST00000436122 256 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX3O60493 RPS29P6-201ENST00000438196 145 ntBASIC3.1□□□□□ -1.91
SNX3O60493 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX3O60493 Z83846.1-201ENST00000446798 265 ntBASIC3.1□□□□□ -1.91
SNX3O60493 SSXP4-201ENST00000451349 245 ntBASIC3.1□□□□□ -1.91
SNX3O60493 SNRPGP9-201ENST00000456025 225 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX3O60493 RPL7P15-201ENST00000461190 712 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 GMPSP1-201ENST00000514075 579 ntBASIC3.1□□□□□ -1.91
SNX3O60493 RNU6-840P-201ENST00000517275 65 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX3O60493 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 ACTR3BP3-201ENST00000565577 979 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.1□□□□□ -1.91
SNX3O60493 AC138749.5-201ENST00000611461 208 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC245517.5-201ENST00000611529 162 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC116165.2-201ENST00000616705 206 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC092140.2-201ENST00000618027 521 ntBASIC3.1□□□□□ -1.91
SNX3O60493 MIR4275-201ENST00000636486 87 ntBASIC3.1□□□□□ -1.91
SNX3O60493 AC010149.2-201ENST00000637608 315 ntBASIC3.1□□□□□ -1.91
SNX3O60493 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SNX3O60493 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.1□□□□□ -1.91
SNX3O60493 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.1□□□□□ -1.91
SNX3O60493 AC138915.3-201ENST00000562908 1389 ntBASIC3.1□□□□□ -1.91
SNX3O60493 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.09□□□□□ -1.91
SNX3O60493 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SNX3O60493 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNX3O60493 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX3O60493 RNA5SP283-201ENST00000365604 119 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC068538.1-201ENST00000376856 336 ntBASIC3.09□□□□□ -1.91
SNX3O60493 MIR141-201ENST00000384975 95 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC110754.1-201ENST00000399740 601 ntBASIC3.09□□□□□ -1.91
SNX3O60493 TXNP7-201ENST00000406296 293 ntBASIC3.09□□□□□ -1.91
SNX3O60493 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.09□□□□□ -1.91
SNX3O60493 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.09□□□□□ -1.91
SNX3O60493 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX3O60493 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX3O60493 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.09□□□□□ -1.91
SNX3O60493 MTCO3P45-201ENST00000443036 613 ntBASIC3.09□□□□□ -1.91
SNX3O60493 H2AFZP6-201ENST00000444403 394 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX3O60493 ELOCP30-201ENST00000447108 299 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AL359385.1-201ENST00000456509 365 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC008481.1-201ENST00000463278 396 ntBASIC3.09□□□□□ -1.91
SNX3O60493 RN7SL499P-201ENST00000481141 276 ntBASIC3.09□□□□□ -1.91
SNX3O60493 VN1R105P-201ENST00000486595 910 ntBASIC3.09□□□□□ -1.91
SNX3O60493 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX3O60493 AC093534.1-201ENST00000504977 132 ntBASIC3.09□□□□□ -1.91
SNX3O60493 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX3O60493 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX3O60493 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX3O60493 DEFB108A-201ENST00000530110 222 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC022878.1-201ENST00000530684 149 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX3O60493 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX3O60493 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms