Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNA5SP425-201ENST00000410336 112 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 RN7SKP223-201ENST00000410582 62 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 RN7SKP101-201ENST00000411376 320 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 POLHP1-201ENST00000411806 470 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 SMC4P1-201ENST00000414479 527 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 DPH3P2-201ENST00000422618 250 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AL160175.1-201ENST00000428124 247 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AL512661.1-201ENST00000434586 1253 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC093155.1-201ENST00000440164 826 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 OR10R1P-201ENST00000441524 1141 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 FGF7P5-201ENST00000441829 291 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AC055855.1-201ENST00000489563 579 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC111193.1-201ENST00000504097 155 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC023141.11-201ENST00000508864 202 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC093770.1-201ENST00000511559 571 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.33□□□□□ -2.2
SSSCA1O60232 SNORA70.16-201ENST00000516390 95 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 SNORA31.25-201ENST00000517242 134 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AC084851.1-201ENST00000529105 249 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC110588.1-201ENST00000559699 137 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 DEFB122-202ENST00000569013 197 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AC025165.5-201ENST00000602802 578 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 AC013468.1-201ENST00000608680 598 ntBASIC1.33□□□□□ -2.2
SSSCA1O60232 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SSSCA1O60232 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SSSCA1O60232 AC104454.1-201ENST00000421341 1401 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 MTCO1P4-201ENST00000520516 1409 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AC016716.1-201ENST00000265882 708 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 RNU4-42P-201ENST00000364738 142 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SSSCA1O60232 RNU6-997P-201ENST00000384725 107 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 RNU6-220P-201ENST00000390919 107 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 Z98742.3-201ENST00000418637 326 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AL139415.2-201ENST00000431968 163 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AC236972.1-201ENST00000433225 199 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 SNORD121B-201ENST00000458838 81 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 HMGN1P8-201ENST00000463578 288 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AC017007.3-201ENST00000479865 435 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 RNU4-18P-201ENST00000516751 149 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.32□□□□□ -2.2
SSSCA1O60232 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.32□□□□□ -2.2
SSSCA1O60232 AP005435.4-201ENST00000529514 284 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.32□□□□□ -2.2
SSSCA1O60232 AL512310.1-201ENST00000548639 172 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.32□□□□□ -2.2
SSSCA1O60232 AC106734.1-201ENST00000568646 663 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AC011260.1-201ENST00000578420 472 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AL355877.2-201ENST00000603670 358 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.32□□□□□ -2.2
SSSCA1O60232 AC087241.4-201ENST00000612441 480 ntBASIC1.32□□□□□ -2.2
SSSCA1O60232 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.32□□□□□ -2.2
SSSCA1O60232 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.32□□□□□ -2.2
SSSCA1O60232 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SSSCA1O60232 MTND5P29-201ENST00000458676 1807 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 RNU6-98P-201ENST00000384173 107 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.31□□□□□ -2.2
SSSCA1O60232 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.31□□□□□ -2.2
SSSCA1O60232 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.31□□□□□ -2.2
SSSCA1O60232 FAM103A2P-201ENST00000444122 354 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 MTCO1P42-201ENST00000457379 726 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 DYNLL1P5-201ENST00000467158 270 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 MTND4LP3-201ENST00000468320 276 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 AC068781.1-201ENST00000488231 618 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.31□□□□□ -2.2
SSSCA1O60232 ANXA2P1-201ENST00000505539 926 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.31□□□□□ -2.2
SSSCA1O60232 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.31□□□□□ -2.2
SSSCA1O60232 AL049870.4-201ENST00000555741 486 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 CYCSP2-201ENST00000558168 301 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.31□□□□□ -2.2
SSSCA1O60232 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.31□□□□□ -2.2
SSSCA1O60232 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.31□□□□□ -2.2
SSSCA1O60232 MIR4299-201ENST00000577899 72 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 UBE2L4-201ENST00000587688 464 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.31□□□□□ -2.2
SSSCA1O60232 AC025588.3-201ENST00000604182 274 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 AC025588.2-201ENST00000604851 466 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 AL356118.1-201ENST00000635272 1078 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 AC110994.2-201ENST00000635481 492 ntBASIC1.31□□□□□ -2.2
SSSCA1O60232 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SSSCA1O60232 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.31□□□□□ -2.2
SSSCA1O60232 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SSSCA1O60232 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.3□□□□□ -2.2
SSSCA1O60232 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.3□□□□□ -2.2
SSSCA1O60232 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms