Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC008013.2-202ENST00000637965 364 ntBASIC4.04□□□□□ -1.76
PROM1O43490 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.04□□□□□ -1.76
PROM1O43490 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.04□□□□□ -1.76
PROM1O43490 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.04□□□□□ -1.76
PROM1O43490 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PROM1O43490 AL359893.1-201ENST00000447628 1580 ntBASIC4.03□□□□□ -1.76
PROM1O43490 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PROM1O43490 RNU1-14P-201ENST00000362759 152 ntBASIC4.03□□□□□ -1.76
PROM1O43490 RNU1-132P-201ENST00000364300 164 ntBASIC4.03□□□□□ -1.76
PROM1O43490 U3.11-201ENST00000364476 212 ntBASIC4.03□□□□□ -1.76
PROM1O43490 RNU4-48P-201ENST00000365559 182 ntBASIC4.03□□□□□ -1.76
PROM1O43490 RNU6-641P-201ENST00000384006 107 ntBASIC4.03□□□□□ -1.76
PROM1O43490 Y_RNA.460-201ENST00000384255 102 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC011933.1-201ENST00000413334 321 ntBASIC4.03□□□□□ -1.76
PROM1O43490 OR1AA1P-201ENST00000419597 916 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AL391219.1-201ENST00000422570 483 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.03□□□□□ -1.76
PROM1O43490 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 RPL21P89-201ENST00000444021 467 ntBASIC4.03□□□□□ -1.76
PROM1O43490 NUTF2P3-201ENST00000448540 384 ntBASIC4.03□□□□□ -1.76
PROM1O43490 SNORA84-201ENST00000459229 133 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC116533.1-201ENST00000459748 321 ntBASIC4.03□□□□□ -1.76
PROM1O43490 RN7SL303P-201ENST00000469773 251 ntBASIC4.03□□□□□ -1.76
PROM1O43490 RN7SL691P-201ENST00000494487 301 ntBASIC4.03□□□□□ -1.76
PROM1O43490 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 AC026427.2-201ENST00000506228 536 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 SNORA31.9-201ENST00000516429 84 ntBASIC4.03□□□□□ -1.76
PROM1O43490 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AP000857.1-201ENST00000532151 543 ntBASIC4.03□□□□□ -1.76
PROM1O43490 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.03□□□□□ -1.76
PROM1O43490 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 AC005668.1-201ENST00000571142 476 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.03□□□□□ -1.76
PROM1O43490 AL132765.2-201ENST00000610812 351 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC006329.2-201ENST00000611491 394 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC114781.5-201ENST00000615297 108 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC009248.2-201ENST00000619826 254 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC002550.2-201ENST00000621246 394 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AL445363.3-201ENST00000623080 671 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AC016588.2-201ENST00000632484 3021 ntBASIC4.03□□□□□ -1.76
PROM1O43490 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PROM1O43490 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
PROM1O43490 AL138713.1-201ENST00000624026 2130 ntBASIC4.03□□□□□ -1.76
PROM1O43490 AL133383.2-201ENST00000622958 2336 ntBASIC4.03□□□□□ -1.77
PROM1O43490 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.02□□□□□ -1.77
PROM1O43490 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PROM1O43490 ASNSP3-201ENST00000451989 1306 ntBASIC4.02□□□□□ -1.77
PROM1O43490 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.02□□□□□ -1.77
PROM1O43490 SNORA7.2-201ENST00000364446 145 ntBASIC4.02□□□□□ -1.77
PROM1O43490 RNU6-1078P-201ENST00000364522 103 ntBASIC4.02□□□□□ -1.77
PROM1O43490 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 RPL32P23-201ENST00000397237 405 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AL122016.1-201ENST00000403365 367 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.02□□□□□ -1.77
PROM1O43490 RNA5SP36-201ENST00000410197 133 ntBASIC4.02□□□□□ -1.77
PROM1O43490 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.02□□□□□ -1.77
PROM1O43490 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.02□□□□□ -1.77
PROM1O43490 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.02□□□□□ -1.77
PROM1O43490 AC007677.1-201ENST00000445757 515 ntBASIC4.02□□□□□ -1.77
PROM1O43490 MRPL50P4-201ENST00000446432 475 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC006480.1-201ENST00000449887 378 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.02□□□□□ -1.77
PROM1O43490 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.02□□□□□ -1.77
PROM1O43490 RPS29P15-201ENST00000458329 171 ntBASIC4.02□□□□□ -1.77
PROM1O43490 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.02□□□□□ -1.77
PROM1O43490 RNU7-59P-201ENST00000459101 61 ntBASIC4.02□□□□□ -1.77
PROM1O43490 RPL7P19-201ENST00000469948 618 ntBASIC4.02□□□□□ -1.77
PROM1O43490 RPL31P13-201ENST00000484151 370 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC091167.1-201ENST00000492017 396 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AP001086.1-201ENST00000494882 321 ntBASIC4.02□□□□□ -1.77
PROM1O43490 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PROM1O43490 AC068305.1-201ENST00000497406 726 ntBASIC4.02□□□□□ -1.77
PROM1O43490 RPL38P4-201ENST00000502376 214 ntBASIC4.02□□□□□ -1.77
PROM1O43490 AC017037.2-201ENST00000513850 890 ntBASIC4.02□□□□□ -1.77
PROM1O43490 RNU2-58P-201ENST00000516403 183 ntBASIC4.02□□□□□ -1.77
PROM1O43490 Y_RNA.701-201ENST00000516812 110 ntBASIC4.02□□□□□ -1.77
PROM1O43490 RNU7-30P-201ENST00000516835 62 ntBASIC4.02□□□□□ -1.77
PROM1O43490 HMGB1P41-201ENST00000520234 440 ntBASIC4.02□□□□□ -1.77
PROM1O43490 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.02□□□□□ -1.77
PROM1O43490 AC107953.1-201ENST00000522216 297 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms