Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 snoU13.22-201ENST00000459428 104 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RPL21P104-201ENST00000464143 478 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 ACTR3P3-201ENST00000480448 893 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 LARP1BP2-201ENST00000486594 519 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC069499.1-201ENST00000489433 509 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC019235.1-201ENST00000503847 207 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC114786.4-201ENST00000508771 728 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM38O00635 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM38O00635 RNU6-798P-201ENST00000516912 103 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM38O00635 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM38O00635 RPL21P5-201ENST00000554662 472 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 HSPE1P5-201ENST00000561489 272 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 FAM60BP-201ENST00000578364 658 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC009977.1-201ENST00000586015 570 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC008752.3-201ENST00000588113 712 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM38O00635 RNU6-87P-201ENST00000607561 108 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AL020991.1-201ENST00000612314 373 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM38O00635 AP001506.1-201ENST00000615444 211 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 MIR7151-201ENST00000617477 60 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC039056.2-201ENST00000622261 511 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AL159972.1-201ENST00000625150 448 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
TRIM38O00635 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TRIM38O00635 AL353746.1-201ENST00000566293 6881 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM38O00635 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM38O00635 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM38O00635 AC009812.4-201ENST00000569134 1805 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 RNU6-600P-201ENST00000362524 99 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.295-201ENST00000364918 102 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.326-201ENST00000365176 113 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.356-201ENST00000365475 113 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 RNU6-432P-201ENST00000384196 109 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM38O00635 SNORA40.3-201ENST00000390964 122 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 RNU4-6P-201ENST00000410804 122 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 RNU2-71P-201ENST00000411395 189 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 HMGB3P23-201ENST00000414981 585 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 AC006946.1-201ENST00000429106 328 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AL445584.1-201ENST00000431451 330 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AC090774.1-201ENST00000435925 246 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 NDUFA5P4-201ENST00000436704 385 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 RPS4XP4-201ENST00000443195 763 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM38O00635 AC108059.3-201ENST00000456388 214 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 RPL23AP55-201ENST00000498163 452 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AC004062.1-201ENST00000509926 645 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM38O00635 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM38O00635 IGKV2-38-201ENST00000517443 247 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 FAM92A1P1-201ENST00000528023 890 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AC063950.1-201ENST00000552036 308 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AL442663.2-201ENST00000554385 511 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 AL391840.1-201ENST00000571144 367 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM38O00635 MIR3682-201ENST00000581338 84 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.05□□□□□ -1.76
TRIM38O00635 AC007687.1-201ENST00000602704 304 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM38O00635 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM38O00635 BX664608.1-201ENST00000610519 487 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.812-201ENST00000610788 101 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.784-201ENST00000613803 101 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.787-201ENST00000616522 101 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.780-201ENST00000617336 101 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM38O00635 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 AL603758.1-201ENST00000618654 241 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 Y_RNA.801-201ENST00000619005 101 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 MIR6500-201ENST00000622700 86 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 AP003122.6-201ENST00000623831 495 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 BDP1P-201ENST00000582658 1990 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
TRIM38O00635 DDX10P1-201ENST00000448545 1933 ntBASIC4.05□□□□□ -1.76
TRIM38O00635 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
TRIM38O00635 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM38O00635 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM38O00635 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms