Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RN7SKP258-201ENST00000517151 304 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 SUMO2P20-201ENST00000520803 283 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AP006587.4-201ENST00000526053 529 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 FKBP1BP1-201ENST00000553366 325 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC007424.1-203ENST00000554613 687 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 FAM60BP-201ENST00000578364 658 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 MIR7853-201ENST00000584820 132 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC067852.3-201ENST00000589177 561 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC010525.2-201ENST00000590920 195 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC104985.2-201ENST00000620598 500 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC079684.1-201ENST00000621405 437 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 AC007998.5-201ENST00000622938 237 ntBASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC85CA6NKD9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC85CA6NKD9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC092435.4-201ENST00000623012 4159 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC092326.2-201ENST00000624772 1561 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 API5P2-201ENST00000397055 1498 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 CPHL1P-201ENST00000461341 3407 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 Y_RNA.86-201ENST00000363020 111 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 RNU6-173P-201ENST00000364215 104 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 RNU6-946P-201ENST00000383878 107 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 SYF2P2-201ENST00000417620 583 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AL691449.1-201ENST00000426570 421 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC079780.1-201ENST00000428259 207 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 SNRPEP8-201ENST00000442866 260 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AL118520.1-201ENST00000450770 291 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 PMCHL2-203ENST00000457791 237 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 HMGB3P30-201ENST00000457863 606 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC008628.2-201ENST00000502605 298 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 VN1R104P-201ENST00000505115 1009 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC108078.2-201ENST00000510750 236 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC010486.1-201ENST00000511793 424 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 RNU4-29P-201ENST00000515943 174 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 RNU6-685P-201ENST00000517088 95 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 BDH2P1-201ENST00000602288 736 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC009994.1-201ENST00000606889 253 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 FAM27D1-201ENST00000612308 341 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AC063943.3-201ENST00000615562 356 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 AL713922.2-201ENST00000619384 716 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 SRP72P2-201ENST00000344851 1979 ntBASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC85CA6NKD9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 ASNSP3-201ENST00000451989 1306 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 XIAPP3-201ENST00000312918 795 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 RN7SKP185-201ENST00000362813 326 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 UBBP2-201ENST00000376781 231 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 SNORA70.6-201ENST00000383934 134 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 RNA5SP187-201ENST00000384400 119 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AL158156.1-201ENST00000422509 473 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 CALM2P2-201ENST00000428512 440 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 CBWD4P-201ENST00000445695 655 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AC090804.1-201ENST00000448870 490 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 RNU7-180P-201ENST00000459240 63 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AP000873.1-201ENST00000463987 400 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 HSPE1P6-201ENST00000479457 291 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 ENPP7P11-201ENST00000505915 627 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 RNU6-352P-201ENST00000516908 107 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 AC109635.4-202ENST00000531666 412 ntBASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC85CA6NKD9 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms