Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU6-270P-201ENST00000364131 105 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 MIR524-201ENST00000385242 87 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 U3.20-201ENST00000390909 217 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL445529.1-201ENST00000398713 389 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL513331.1-201ENST00000411908 397 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL139413.1-201ENST00000421309 217 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 MTCO3P30-201ENST00000426425 670 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 FGF7P5-201ENST00000441829 291 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 RAC1P7-201ENST00000445367 377 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 MTCYBP3-201ENST00000445588 1137 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 COX6CP18-201ENST00000448769 222 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 EIF4EP3-201ENST00000498782 656 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC109464.2-201ENST00000510242 943 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC008413.1-201ENST00000511864 177 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AP001317.1-201ENST00000531194 960 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 ZNF971P-201ENST00000562068 1249 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC093519.1-201ENST00000566109 298 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 RPS15AP11-201ENST00000594193 385 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC013444.2-201ENST00000603317 787 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC245884.12-201ENST00000615364 59 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL445493.3-201ENST00000619568 477 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 MIR6766-201ENST00000622641 72 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AL356585.4-201ENST00000623078 1229 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 CU459211.1-201ENST00000635667 749 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AP003399.1-201ENST00000637534 361 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 GDI2P1-201ENST00000429312 1336 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AC097714.1-201ENST00000511272 1647 ntBASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC009902.3-201ENST00000606235 2172 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 FRG1BP-201ENST00000278882 761 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RNU1-73P-201ENST00000383971 164 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RNU6-1035P-201ENST00000384477 107 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 SNORA80E-201ENST00000384744 137 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 MIR217-201ENST00000384817 110 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 MIR135A2-201ENST00000384854 100 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RNU2-47P-201ENST00000410649 186 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RNU2-15P-201ENST00000410692 191 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 BX664727.1-201ENST00000416024 466 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AL121871.1-201ENST00000443413 436 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RPL7P36-201ENST00000444633 681 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RNU7-26P-201ENST00000458980 63 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC128713.1-201ENST00000471495 306 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC090096.1-201ENST00000489168 390 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RPL23AP49-201ENST00000492925 468 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 MTCYBP17-201ENST00000503579 789 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC118465.1-201ENST00000513820 1271 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RNU5A-7P-201ENST00000515979 116 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 SNORA48.10-201ENST00000516965 160 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 ATP5F1P5-201ENST00000526403 760 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC009063.1-201ENST00000563342 702 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC009127.3-201ENST00000570531 403 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 TPMTP1-201ENST00000592307 737 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC012467.1-201ENST00000607740 256 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 HMGB1P24-202ENST00000615653 685 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC080188.3-201ENST00000624842 748 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 MIR203B-201ENST00000636080 86 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 Z99496.1-201ENST00000469424 1477 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 AC022336.2-201ENST00000568966 2538 ntBASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV41A0A0B4J266 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 ELF2P3-201ENST00000445099 1506 ntBASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV41A0A0B4J266 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms