Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC087359.1-201ENST00000508335 1740 ntBASIC1.26□□□□□ -2.21
TRAV1-2A0A0B4J238 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 ADAM3A-203ENST00000461344 2157 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU5D-1-201ENST00000363299 116 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 RPS15AP38-201ENST00000413110 372 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AL512504.1-201ENST00000415494 778 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 ARL2BPP3-201ENST00000421226 480 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 Z93242.1-201ENST00000427102 353 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AC090774.1-201ENST00000435925 246 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AL590762.3-201ENST00000436372 640 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 CBX3P3-201ENST00000508108 532 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 NDUFB4P2-201ENST00000509515 391 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 POLR2KP1-201ENST00000553226 168 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AL049870.4-201ENST00000555741 486 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AC023824.2-201ENST00000566185 400 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 MIR3609-201ENST00000582661 80 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 SDR42E1P2-201ENST00000614861 481 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 SDR42E1P4-201ENST00000620894 481 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 AC073592.7-201ENST00000623659 507 ntBASIC1.25□□□□□ -2.21
TRAV1-2A0A0B4J238 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AL513185.3-201ENST00000433335 1300 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 U8.1-201ENST00000362843 134 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU4-31P-201ENST00000384211 141 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 MIR493-201ENST00000385254 89 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AL627390.1-201ENST00000396055 340 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 TMEM167AP1-201ENST00000423409 219 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC079780.1-201ENST00000428259 207 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 OR6K5P-201ENST00000447050 945 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 RPS29P23-201ENST00000458635 123 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 NAP1L1P3-201ENST00000462291 880 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC104629.2-201ENST00000468627 598 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AP001804.3-201ENST00000525146 880 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC139103.1-201ENST00000534696 1030 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC024224.1-201ENST00000538284 609 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AK6P1-201ENST00000540219 478 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC106782.4-201ENST00000568264 210 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC011471.1-201ENST00000585766 187 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 NTAN1P1-201ENST00000603150 646 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 SNORD14A-201ENST00000606526 91 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AC135803.1-201ENST00000608748 565 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AL161629.2-201ENST00000615347 275 ntBASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.24□□□□□ -2.21
TRAV1-2A0A0B4J238 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC011477.1-204ENST00000623416 1325 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU6-989P-201ENST00000362756 107 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 U8.13-201ENST00000390842 128 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 UBE2V1P2-201ENST00000397758 440 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 MIR1323-201ENST00000408090 73 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 SNORD23.1-201ENST00000408212 104 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 RNA5SP508-201ENST00000411327 119 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 MTCO3P46-201ENST00000425787 232 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 GTF2IP7-202ENST00000436677 309 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 YWHAZP8-201ENST00000436935 731 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC093155.1-201ENST00000440164 826 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 RNU1-98P-201ENST00000458992 160 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC097493.1-201ENST00000463958 372 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC068587.2-201ENST00000478386 781 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 RNF138P1-201ENST00000502765 546 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC093801.2-201ENST00000503966 1050 ntBASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TRAV1-2A0A0B4J238 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms