Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 AC008562.1-201ENST00000521763 330 ntBASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 SETP7-201ENST00000552169 453 ntBASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 MTCYBP28-201ENST00000566728 1132 ntBASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 YWHAEP7-203ENST00000622054 312 ntBASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 AC110994.2-201ENST00000635481 492 ntBASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV30A0A087WSZ9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 RNU6-1074P-201ENST00000383995 104 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 RSL24D1P4-201ENST00000400938 484 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 PRRC2CP1-201ENST00000404428 159 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 SNORA3.2-201ENST00000408221 125 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 RNU2-20P-201ENST00000410425 191 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 VN1R51P-201ENST00000411675 945 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AC124916.1-201ENST00000444020 547 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AC017007.3-201ENST00000479865 435 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 RPL21P99-201ENST00000480369 423 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 OR52A4P-202ENST00000481634 799 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 RNF138P1-201ENST00000502765 546 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AC096745.1-201ENST00000509945 370 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 COX6B1P6-201ENST00000522347 255 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 CBX3P4-201ENST00000538909 354 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 HMGB1P14-201ENST00000557424 591 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AC090751.1-201ENST00000566966 267 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 MIR4419B-201ENST00000577260 68 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 AC025588.2-201ENST00000604851 466 ntBASIC1.43□□□□□ -2.18
TRAV30A0A087WSZ9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 MIR449A-201ENST00000362113 91 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 RNA5SP88-201ENST00000365560 109 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 RNU6-220P-201ENST00000390919 107 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 RNU2-2P-201ENST00000410396 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC234781.2-201ENST00000426370 994 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 FABP5P13-201ENST00000452144 328 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 RPL30P9-201ENST00000465586 330 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 MTND4LP3-201ENST00000468320 276 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC106872.3-201ENST00000495104 446 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC093770.1-201ENST00000511559 571 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC008549.1-201ENST00000512900 643 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 MIR4504-201ENST00000577413 92 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 MIR4648-201ENST00000580107 72 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC068790.3-201ENST00000602988 553 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AL355877.2-201ENST00000603670 358 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC126118.1-201ENST00000607744 628 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.15-201ENST00000611544 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.16-201ENST00000613119 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.12-201ENST00000613778 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.20-201ENST00000613956 192 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.9-201ENST00000615427 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.11-201ENST00000616345 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.2-201ENST00000616535 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.3-201ENST00000617785 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.19-201ENST00000618602 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 RNU2-1-201ENST00000618664 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.6-201ENST00000619225 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.5-201ENST00000619465 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 U2.10-201ENST00000620268 191 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AL158801.5-201ENST00000623123 465 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AC080128.1-201ENST00000474389 1917 ntBASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.42□□□□□ -2.18
TRAV30A0A087WSZ9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 MTCO1P4-201ENST00000520516 1409 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 MTND5P29-201ENST00000458676 1807 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 RPL7P27-201ENST00000403775 720 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 PTGES3P2-201ENST00000407942 482 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AL357078.2-201ENST00000416486 427 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 CYCSP48-201ENST00000417124 323 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AL121769.1-201ENST00000469473 401 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC140059.1-201ENST00000489238 361 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC007182.2-201ENST00000489251 402 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 AC055855.1-201ENST00000489563 579 ntBASIC1.41□□□□□ -2.18
TRAV30A0A087WSZ9 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms