Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 FSCN1P1-201ENST00000568912 1481 ntBASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 AC130371.2-201ENST00000619443 611 ntBASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHB13Q9Y5F0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 AC091390.4-202ENST00000476426 537 ntBASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 MIR6786-201ENST00000616843 113 ntBASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHB13Q9Y5F0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 AC011506.1-201ENST00000474329 610 ntBASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 NUDT16P1-203ENST00000513809 620 ntBASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 AC011298.2-201ENST00000617989 482 ntBASIC21.08■□□□□ 0.97
PCDHB13Q9Y5F0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PCDHB13Q9Y5F0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 AP000974.1-201ENST00000623909 2387 ntBASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 B3GAT3P1-201ENST00000471720 806 ntBASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 AC116562.2-201ENST00000507042 360 ntBASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDHB13Q9Y5F0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms