Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssr1Q9CY50 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Gm3375-201ENSMUST00000203929 796 ntBASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Odf3b-204ENSMUST00000227834 930 ntBASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssr1Q9CY50 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssr1Q9CY50 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ssr1Q9CY50 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.64■□□□□ 0.42
Ssr1Q9CY50 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssr1Q9CY50 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ssr1Q9CY50 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms