Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm7370-201ENSMUST00000219471 767 ntBASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhb4Q91XZ6 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Gm13186-201ENSMUST00000118031 316 ntBASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Gm11539-201ENSMUST00000119837 557 ntBASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Gm2274-201ENSMUST00000184539 609 ntBASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb4Q91XZ6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Phf7-203ENSMUST00000226565 1971 ntBASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb4Q91XZ6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Gm13436-201ENSMUST00000120418 567 ntBASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb4Q91XZ6 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb4Q91XZ6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms