Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.65■□□□□ 0.42
Trim68Q8K243 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trim68Q8K243 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim68Q8K243 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim68Q8K243 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim68Q8K243 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim68Q8K243 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim68Q8K243 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim68Q8K243 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trim68Q8K243 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
Trim68Q8K243 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim68Q8K243 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Trim68Q8K243 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim68Q8K243 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Phf7-203ENSMUST00000226565 1971 ntBASIC17.64■□□□□ 0.41
Trim68Q8K243 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim68Q8K243 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.63■□□□□ 0.41
Trim68Q8K243 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Trim68Q8K243 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.63■□□□□ 0.41
Trim68Q8K243 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.63■□□□□ 0.41
Trim68Q8K243 Gm6376-201ENSMUST00000209407 580 ntBASIC17.63■□□□□ 0.41
Trim68Q8K243 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.63■□□□□ 0.41
Trim68Q8K243 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim68Q8K243 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim68Q8K243 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim68Q8K243 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim68Q8K243 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Trim68Q8K243 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.62■□□□□ 0.41
Trim68Q8K243 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trim68Q8K243 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Gm27000-201ENSMUST00000182943 842 ntBASIC17.62■□□□□ 0.41
Trim68Q8K243 Mir8112-201ENSMUST00000184382 131 ntBASIC17.62■□□□□ 0.41
Trim68Q8K243 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Trim68Q8K243 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim68Q8K243 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.62■□□□□ 0.41
Trim68Q8K243 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim68Q8K243 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.61■□□□□ 0.41
Trim68Q8K243 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trim68Q8K243 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.61■□□□□ 0.41
Trim68Q8K243 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.61■□□□□ 0.41
Trim68Q8K243 Gm6296-201ENSMUST00000222599 943 ntBASIC17.61■□□□□ 0.41
Trim68Q8K243 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim68Q8K243 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim68Q8K243 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim68Q8K243 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trim68Q8K243 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trim68Q8K243 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms