Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 POM121L3P-201ENST00000419331 1163 ntBASIC10.48□□□□□ -0.73
UBR4Q5T4S7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AC002472.2-201ENST00000442739 958 ntBASIC10.48□□□□□ -0.73
UBR4Q5T4S7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AC127496.7-201ENST00000625110 1798 ntBASIC10.48□□□□□ -0.73
UBR4Q5T4S7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 DUT-210ENST00000559935 569 ntTSL 3 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC10.48□□□□□ -0.73
UBR4Q5T4S7 AC233702.3-201ENST00000578656 1387 ntBASIC10.47□□□□□ -0.73
UBR4Q5T4S7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 NME6-203ENST00000415644 849 ntTSL 2 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 TUBB8P6-201ENST00000436895 1288 ntBASIC10.47□□□□□ -0.73
UBR4Q5T4S7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 MCCD1P2-201ENST00000423228 335 ntBASIC10.47□□□□□ -0.73
UBR4Q5T4S7 UGT1A2P-201ENST00000454886 866 ntBASIC10.47□□□□□ -0.73
UBR4Q5T4S7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 AC008608.2-201ENST00000606089 416 ntBASIC10.47□□□□□ -0.73
UBR4Q5T4S7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBR4Q5T4S7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 AP001269.4-201ENST00000609611 512 ntBASIC10.46□□□□□ -0.73
UBR4Q5T4S7 AJ011932.1-201ENST00000621707 465 ntBASIC10.46□□□□□ -0.73
UBR4Q5T4S7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBR4Q5T4S7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 AL078644.1-201ENST00000609881 752 ntBASIC10.46□□□□□ -0.74
UBR4Q5T4S7 AL592071.1-201ENST00000611956 408 ntBASIC10.46□□□□□ -0.74
UBR4Q5T4S7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 AC236430.1-201ENST00000402231 743 ntBASIC10.46□□□□□ -0.74
UBR4Q5T4S7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 KRT8P41-201ENST00000533985 1514 ntBASIC10.46□□□□□ -0.74
UBR4Q5T4S7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC10.46□□□□□ -0.74
UBR4Q5T4S7 HEIH-201ENST00000623091 1652 ntBASIC10.46□□□□□ -0.74
UBR4Q5T4S7 AC129492.6-201ENST00000611383 1305 ntBASIC10.46□□□□□ -0.74
UBR4Q5T4S7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC10.45□□□□□ -0.74
UBR4Q5T4S7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms