Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SNAPC4Q5SXM2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC31.28■■■□□ 2.6
SNAPC4Q5SXM2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SNAPC4Q5SXM2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SNAPC4Q5SXM2 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC31.28■■■□□ 2.6
SNAPC4Q5SXM2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
SNAPC4Q5SXM2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SNAPC4Q5SXM2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SNAPC4Q5SXM2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 FAM220CP-201ENST00000395253 831 ntBASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 IGHV3-47-201ENST00000425060 335 ntBASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 KRT18P58-201ENST00000527480 1120 ntBASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 AL773604.1-201ENST00000617417 272 ntBASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SNAPC4Q5SXM2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC31.26■■■□□ 2.6
SNAPC4Q5SXM2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
SNAPC4Q5SXM2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
SNAPC4Q5SXM2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SNAPC4Q5SXM2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 FICD-205ENST00000552758 603 ntTSL 2 BASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 MIR7706-201ENST00000613747 67 ntBASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SNAPC4Q5SXM2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC31.25■■■□□ 2.59
SNAPC4Q5SXM2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC31.25■■■□□ 2.59
SNAPC4Q5SXM2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SNAPC4Q5SXM2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
SNAPC4Q5SXM2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC31.25■■■□□ 2.59
SNAPC4Q5SXM2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC31.25■■■□□ 2.59
SNAPC4Q5SXM2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC31.25■■■□□ 2.59
SNAPC4Q5SXM2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 HMGN1P19-201ENST00000436976 333 ntBASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 GOLGA2P11-201ENST00000562660 1621 ntBASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 AC243591.1-201ENST00000452967 1364 ntBASIC31.24■■■□□ 2.59
SNAPC4Q5SXM2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 POLD2P1-201ENST00000511220 997 ntBASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 AC026310.3-201ENST00000625186 2373 ntBASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC31.23■■■□□ 2.59
SNAPC4Q5SXM2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 GRAMD4P1-201ENST00000435181 1110 ntBASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 MCCD1P1-208ENST00000445732 328 ntBASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SNAPC4Q5SXM2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC31.21■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms