Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.14■■□□□ 1.3
RFX7Q2KHR2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.14■■□□□ 1.29
RFX7Q2KHR2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RFX7Q2KHR2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 IRX1P1-201ENST00000438849 1838 ntBASIC23.13■■□□□ 1.29
RFX7Q2KHR2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.13■■□□□ 1.29
RFX7Q2KHR2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RFX7Q2KHR2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 KRT8P11-201ENST00000409686 1436 ntBASIC23.12■■□□□ 1.29
RFX7Q2KHR2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 FP475955.4-201ENST00000623131 1990 ntBASIC23.12■■□□□ 1.29
RFX7Q2KHR2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 HIST1H2APS4-201ENST00000362070 348 ntBASIC23.12■■□□□ 1.29
RFX7Q2KHR2 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 WWOX-216ENST00000569818 525 ntBASIC23.12■■□□□ 1.29
RFX7Q2KHR2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC23.12■■□□□ 1.29
RFX7Q2KHR2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 AC092338.2-201ENST00000568827 1415 ntBASIC23.11■■□□□ 1.29
RFX7Q2KHR2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 HMGA1P5-201ENST00000412453 271 ntBASIC23.11■■□□□ 1.29
RFX7Q2KHR2 SLC25A1P2-201ENST00000430693 912 ntBASIC23.11■■□□□ 1.29
RFX7Q2KHR2 AC128688.1-201ENST00000487626 519 ntBASIC23.11■■□□□ 1.29
RFX7Q2KHR2 AL023803.3-201ENST00000615559 522 ntBASIC23.11■■□□□ 1.29
RFX7Q2KHR2 AL138966.2-201ENST00000621997 464 ntBASIC23.11■■□□□ 1.29
RFX7Q2KHR2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RFX7Q2KHR2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
RFX7Q2KHR2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
RFX7Q2KHR2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.1■■□□□ 1.29
RFX7Q2KHR2 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC23.1■■□□□ 1.29
RFX7Q2KHR2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFX7Q2KHR2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RFX7Q2KHR2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms