Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav12-1A0N8R1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.61□□□□□ -0.23
Trav12-1A0N8R1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Prob1-201ENSMUST00000097619 3021 ntBASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.6□□□□□ -0.23
Trav12-1A0N8R1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Gm8520-201ENSMUST00000186517 868 ntBASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms