Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Gm44549-201ENSMUST00000208351 577 ntBASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav4-3A0A0B4J1K1 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Trav4-3A0A0B4J1K1 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Trav4-3A0A0B4J1K1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.15□□□□□ -0.63
Trav4-3A0A0B4J1K1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Trav4-3A0A0B4J1K1 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.15□□□□□ -0.63
Trav4-3A0A0B4J1K1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav4-3A0A0B4J1K1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Gm10138-203ENSMUST00000206952 366 ntBASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Appbp2os-202ENSMUST00000206972 447 ntBASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Ap3s1-204ENSMUST00000225520 957 ntBASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav4-3A0A0B4J1K1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms