Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Hdac6Q9Z2V5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Hdac6Q9Z2V5 Gm14523-201ENSMUST00000117260 558 ntBASIC30.11■■■□□ 2.41
Hdac6Q9Z2V5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Hdac6Q9Z2V5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Hdac6Q9Z2V5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Hdac6Q9Z2V5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Hdac6Q9Z2V5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Hdac6Q9Z2V5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Hdac6Q9Z2V5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.08■■■□□ 2.41
Hdac6Q9Z2V5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Hdac6Q9Z2V5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30.08■■■□□ 2.41
Hdac6Q9Z2V5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Hdac6Q9Z2V5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hdac6Q9Z2V5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.07■■■□□ 2.4
Hdac6Q9Z2V5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.07■■■□□ 2.4
Hdac6Q9Z2V5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hdac6Q9Z2V5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hdac6Q9Z2V5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hdac6Q9Z2V5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC30.06■■■□□ 2.4
Hdac6Q9Z2V5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
Hdac6Q9Z2V5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30.05■■■□□ 2.4
Hdac6Q9Z2V5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hdac6Q9Z2V5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hdac6Q9Z2V5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hdac6Q9Z2V5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Hdac6Q9Z2V5 Gm9910-201ENSMUST00000195385 1550 ntBASIC30.04■■■□□ 2.4
Hdac6Q9Z2V5 Gm9812-201ENSMUST00000061934 968 ntBASIC30.04■■■□□ 2.4
Hdac6Q9Z2V5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Hdac6Q9Z2V5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC30.04■■■□□ 2.4
Hdac6Q9Z2V5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Hdac6Q9Z2V5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hdac6Q9Z2V5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hdac6Q9Z2V5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Hdac6Q9Z2V5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Hdac6Q9Z2V5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.99■■■□□ 2.39
Hdac6Q9Z2V5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Hdac6Q9Z2V5 AC151971.4-201ENSMUST00000214717 704 ntBASIC29.99■■■□□ 2.39
Hdac6Q9Z2V5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hdac6Q9Z2V5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29.98■■■□□ 2.39
Hdac6Q9Z2V5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
Hdac6Q9Z2V5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Hdac6Q9Z2V5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
Hdac6Q9Z2V5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC29.96■■■□□ 2.39
Hdac6Q9Z2V5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Hdac6Q9Z2V5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29.95■■■□□ 2.39
Hdac6Q9Z2V5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
Hdac6Q9Z2V5 Zxda-201ENSMUST00000117281 2621 ntBASIC29.94■■■□□ 2.38
Hdac6Q9Z2V5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Hdac6Q9Z2V5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Hdac6Q9Z2V5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
Hdac6Q9Z2V5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC29.93■■■□□ 2.38
Hdac6Q9Z2V5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Hdac6Q9Z2V5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.92■■■□□ 2.38
Hdac6Q9Z2V5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
Hdac6Q9Z2V5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Hdac6Q9Z2V5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Hdac6Q9Z2V5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Hdac6Q9Z2V5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Hdac6Q9Z2V5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
Hdac6Q9Z2V5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Hdac6Q9Z2V5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC29.88■■■□□ 2.37
Hdac6Q9Z2V5 Gm5067-201ENSMUST00000170449 1009 ntBASIC29.88■■■□□ 2.37
Hdac6Q9Z2V5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.87■■■□□ 2.37
Hdac6Q9Z2V5 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Hdac6Q9Z2V5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Hdac6Q9Z2V5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Hdac6Q9Z2V5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Hdac6Q9Z2V5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Hdac6Q9Z2V5 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC29.85■■■□□ 2.37
Hdac6Q9Z2V5 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC29.84■■■□□ 2.37
Hdac6Q9Z2V5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Hdac6Q9Z2V5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Hdac6Q9Z2V5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Hdac6Q9Z2V5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29.83■■■□□ 2.37
Hdac6Q9Z2V5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Hdac6Q9Z2V5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Hdac6Q9Z2V5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Hdac6Q9Z2V5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.82■■■□□ 2.36
Hdac6Q9Z2V5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Hdac6Q9Z2V5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Hdac6Q9Z2V5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Hdac6Q9Z2V5 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Hdac6Q9Z2V5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Hdac6Q9Z2V5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.79■■■□□ 2.36
Hdac6Q9Z2V5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Hdac6Q9Z2V5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Hdac6Q9Z2V5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Hdac6Q9Z2V5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
Hdac6Q9Z2V5 Gm10420-201ENSMUST00000121713 882 ntBASIC29.78■■■□□ 2.36
Hdac6Q9Z2V5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
Hdac6Q9Z2V5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC29.78■■■□□ 2.36
Hdac6Q9Z2V5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Hdac6Q9Z2V5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hdac6Q9Z2V5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hdac6Q9Z2V5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC29.77■■■□□ 2.36
Hdac6Q9Z2V5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hdac6Q9Z2V5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC29.77■■■□□ 2.36
Hdac6Q9Z2V5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Hdac6Q9Z2V5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms