Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Phf1Q9Z1B8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Phf1Q9Z1B8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Phf1Q9Z1B8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Phf1Q9Z1B8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.28■■□□□ 1
Phf1Q9Z1B8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Phf1Q9Z1B8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.28■■□□□ 1
Phf1Q9Z1B8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.28■■□□□ 1
Phf1Q9Z1B8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Phf1Q9Z1B8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Phf1Q9Z1B8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Phf1Q9Z1B8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.27■■□□□ 1
Phf1Q9Z1B8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.27■■□□□ 1
Phf1Q9Z1B8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.27■■□□□ 1
Phf1Q9Z1B8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.27■■□□□ 1
Phf1Q9Z1B8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Phf1Q9Z1B8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Phf1Q9Z1B8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Phf1Q9Z1B8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Phf1Q9Z1B8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.25■□□□□ 0.99
Phf1Q9Z1B8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Phf1Q9Z1B8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Phf1Q9Z1B8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Phf1Q9Z1B8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Phf1Q9Z1B8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Phf1Q9Z1B8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Phf1Q9Z1B8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Phf1Q9Z1B8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Phf1Q9Z1B8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phf1Q9Z1B8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Phf1Q9Z1B8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 Gm11175-201ENSMUST00000116172 543 ntBASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Phf1Q9Z1B8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Phf1Q9Z1B8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Phf1Q9Z1B8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Phf1Q9Z1B8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Phf1Q9Z1B8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Phf1Q9Z1B8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Phf1Q9Z1B8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Phf1Q9Z1B8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Phf1Q9Z1B8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Phf1Q9Z1B8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Phf1Q9Z1B8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.18■□□□□ 0.98
Phf1Q9Z1B8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Phf1Q9Z1B8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Phf1Q9Z1B8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Phf1Q9Z1B8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Phf1Q9Z1B8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Phf1Q9Z1B8 Mir6538-201ENSMUST00000183713 110 ntBASIC21.16■□□□□ 0.98
Phf1Q9Z1B8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Phf1Q9Z1B8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Phf1Q9Z1B8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Phf1Q9Z1B8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Phf1Q9Z1B8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Phf1Q9Z1B8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Phf1Q9Z1B8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.13■□□□□ 0.97
Phf1Q9Z1B8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Phf1Q9Z1B8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Phf1Q9Z1B8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Phf1Q9Z1B8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Phf1Q9Z1B8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Phf1Q9Z1B8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.1■□□□□ 0.97
Phf1Q9Z1B8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Phf1Q9Z1B8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Phf1Q9Z1B8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Phf1Q9Z1B8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Phf1Q9Z1B8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Phf1Q9Z1B8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Phf1Q9Z1B8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.09■□□□□ 0.97
Phf1Q9Z1B8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.09■□□□□ 0.97
Phf1Q9Z1B8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Phf1Q9Z1B8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.08■□□□□ 0.97
Phf1Q9Z1B8 Gm6311-201ENSMUST00000073790 878 ntBASIC21.08■□□□□ 0.97
Phf1Q9Z1B8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Phf1Q9Z1B8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Phf1Q9Z1B8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Phf1Q9Z1B8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.06■□□□□ 0.96
Phf1Q9Z1B8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Phf1Q9Z1B8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Phf1Q9Z1B8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.03■□□□□ 0.96
Phf1Q9Z1B8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.03■□□□□ 0.96
Phf1Q9Z1B8 Cap2-205ENSMUST00000225824 1634 ntBASIC21.03■□□□□ 0.96
Phf1Q9Z1B8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Phf1Q9Z1B8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Phf1Q9Z1B8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Phf1Q9Z1B8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Phf1Q9Z1B8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms