Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Clcn2Q9R0A1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
Clcn2Q9R0A1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Clcn2Q9R0A1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Clcn2Q9R0A1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.7■■□□□ 1.39
Clcn2Q9R0A1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Clcn2Q9R0A1 Nkain2-201ENSMUST00000092602 558 ntBASIC23.7■■□□□ 1.38
Clcn2Q9R0A1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Clcn2Q9R0A1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.69■■□□□ 1.38
Clcn2Q9R0A1 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.69■■□□□ 1.38
Clcn2Q9R0A1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Clcn2Q9R0A1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Clcn2Q9R0A1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Clcn2Q9R0A1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.68■■□□□ 1.38
Clcn2Q9R0A1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.68■■□□□ 1.38
Clcn2Q9R0A1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Clcn2Q9R0A1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn2Q9R0A1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Clcn2Q9R0A1 Gm6821-201ENSMUST00000107540 542 ntBASIC23.66■■□□□ 1.38
Clcn2Q9R0A1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Clcn2Q9R0A1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.66■■□□□ 1.38
Clcn2Q9R0A1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Clcn2Q9R0A1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Clcn2Q9R0A1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Clcn2Q9R0A1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Clcn2Q9R0A1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Clcn2Q9R0A1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Clcn2Q9R0A1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Clcn2Q9R0A1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
Clcn2Q9R0A1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Clcn2Q9R0A1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Clcn2Q9R0A1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Clcn2Q9R0A1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Clcn2Q9R0A1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.63■■□□□ 1.37
Clcn2Q9R0A1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Clcn2Q9R0A1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Clcn2Q9R0A1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.62■■□□□ 1.37
Clcn2Q9R0A1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.62■■□□□ 1.37
Clcn2Q9R0A1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Clcn2Q9R0A1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Clcn2Q9R0A1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Clcn2Q9R0A1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Clcn2Q9R0A1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Clcn2Q9R0A1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Clcn2Q9R0A1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Clcn2Q9R0A1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Clcn2Q9R0A1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Clcn2Q9R0A1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Clcn2Q9R0A1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
Clcn2Q9R0A1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Clcn2Q9R0A1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Clcn2Q9R0A1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Clcn2Q9R0A1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Clcn2Q9R0A1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Clcn2Q9R0A1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Clcn2Q9R0A1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Clcn2Q9R0A1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Clcn2Q9R0A1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Clcn2Q9R0A1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.56■■□□□ 1.36
Clcn2Q9R0A1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Clcn2Q9R0A1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Clcn2Q9R0A1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Clcn2Q9R0A1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
Clcn2Q9R0A1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Clcn2Q9R0A1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Clcn2Q9R0A1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Clcn2Q9R0A1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Clcn2Q9R0A1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Clcn2Q9R0A1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.52■■□□□ 1.36
Clcn2Q9R0A1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
Clcn2Q9R0A1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Clcn2Q9R0A1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Clcn2Q9R0A1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Clcn2Q9R0A1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Clcn2Q9R0A1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Clcn2Q9R0A1 Gm30023-201ENSMUST00000197970 889 ntBASIC23.51■■□□□ 1.35
Clcn2Q9R0A1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.51■■□□□ 1.35
Clcn2Q9R0A1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Clcn2Q9R0A1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.49■■□□□ 1.35
Clcn2Q9R0A1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Clcn2Q9R0A1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Clcn2Q9R0A1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Clcn2Q9R0A1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Clcn2Q9R0A1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.48■■□□□ 1.35
Clcn2Q9R0A1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Clcn2Q9R0A1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.47■■□□□ 1.35
Clcn2Q9R0A1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.46■■□□□ 1.35
Clcn2Q9R0A1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Clcn2Q9R0A1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Clcn2Q9R0A1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Clcn2Q9R0A1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Clcn2Q9R0A1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.45■■□□□ 1.34
Clcn2Q9R0A1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Clcn2Q9R0A1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Clcn2Q9R0A1 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Clcn2Q9R0A1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Clcn2Q9R0A1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Clcn2Q9R0A1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Clcn2Q9R0A1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Clcn2Q9R0A1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms