Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.56■■□□□ 1.36
Shroom3Q9QXN0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom3Q9QXN0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom3Q9QXN0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom3Q9QXN0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.55■■□□□ 1.36
Shroom3Q9QXN0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Shroom3Q9QXN0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Shroom3Q9QXN0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Shroom3Q9QXN0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Shroom3Q9QXN0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.54■■□□□ 1.36
Shroom3Q9QXN0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Shroom3Q9QXN0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Shroom3Q9QXN0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Shroom3Q9QXN0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Shroom3Q9QXN0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Shroom3Q9QXN0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Shroom3Q9QXN0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Shroom3Q9QXN0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Shroom3Q9QXN0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Shroom3Q9QXN0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Shroom3Q9QXN0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.49■■□□□ 1.35
Shroom3Q9QXN0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Shroom3Q9QXN0 Particl-201ENSMUST00000205370 1560 ntBASIC23.48■■□□□ 1.35
Shroom3Q9QXN0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Shroom3Q9QXN0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.45■■□□□ 1.35
Shroom3Q9QXN0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Shroom3Q9QXN0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Shroom3Q9QXN0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom3Q9QXN0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Shroom3Q9QXN0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.44■■□□□ 1.34
Shroom3Q9QXN0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.43■■□□□ 1.34
Shroom3Q9QXN0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Shroom3Q9QXN0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Shroom3Q9QXN0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Shroom3Q9QXN0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Shroom3Q9QXN0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom3Q9QXN0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Shroom3Q9QXN0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom3Q9QXN0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.4■■□□□ 1.34
Shroom3Q9QXN0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Shroom3Q9QXN0 Cap2-205ENSMUST00000225824 1634 ntBASIC23.4■■□□□ 1.34
Shroom3Q9QXN0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Shroom3Q9QXN0 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.38■■□□□ 1.33
Shroom3Q9QXN0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Shroom3Q9QXN0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
Shroom3Q9QXN0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom3Q9QXN0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom3Q9QXN0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Shroom3Q9QXN0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Shroom3Q9QXN0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Shroom3Q9QXN0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.34■■□□□ 1.33
Shroom3Q9QXN0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom3Q9QXN0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom3Q9QXN0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Shroom3Q9QXN0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Shroom3Q9QXN0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom3Q9QXN0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.32■■□□□ 1.32
Shroom3Q9QXN0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom3Q9QXN0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom3Q9QXN0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom3Q9QXN0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Shroom3Q9QXN0 Gm6311-201ENSMUST00000073790 878 ntBASIC23.32■■□□□ 1.32
Shroom3Q9QXN0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Shroom3Q9QXN0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Shroom3Q9QXN0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.3■■□□□ 1.32
Shroom3Q9QXN0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom3Q9QXN0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Shroom3Q9QXN0 Gm37136-201ENSMUST00000194368 194 ntBASIC23.29■■□□□ 1.32
Shroom3Q9QXN0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.29■■□□□ 1.32
Shroom3Q9QXN0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.28■■□□□ 1.32
Shroom3Q9QXN0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Shroom3Q9QXN0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom3Q9QXN0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom3Q9QXN0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom3Q9QXN0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom3Q9QXN0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom3Q9QXN0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Shroom3Q9QXN0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.26■■□□□ 1.31
Shroom3Q9QXN0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom3Q9QXN0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom3Q9QXN0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Shroom3Q9QXN0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom3Q9QXN0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Shroom3Q9QXN0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom3Q9QXN0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.24■■□□□ 1.31
Shroom3Q9QXN0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom3Q9QXN0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom3Q9QXN0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom3Q9QXN0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom3Q9QXN0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Shroom3Q9QXN0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom3Q9QXN0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom3Q9QXN0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Shroom3Q9QXN0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom3Q9QXN0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Shroom3Q9QXN0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Shroom3Q9QXN0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom3Q9QXN0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Shroom3Q9QXN0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Shroom3Q9QXN0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms