Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Zc3h8Q9JJ48 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zc3h8Q9JJ48 Gm6311-201ENSMUST00000073790 878 ntBASIC21.59■■□□□ 1.05
Zc3h8Q9JJ48 Gm4799-201ENSMUST00000095396 657 ntBASIC21.59■■□□□ 1.05
Zc3h8Q9JJ48 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zc3h8Q9JJ48 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Zc3h8Q9JJ48 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Zc3h8Q9JJ48 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Zc3h8Q9JJ48 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.57■■□□□ 1.04
Zc3h8Q9JJ48 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.57■■□□□ 1.04
Zc3h8Q9JJ48 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.56■■□□□ 1.04
Zc3h8Q9JJ48 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Zc3h8Q9JJ48 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.56■■□□□ 1.04
Zc3h8Q9JJ48 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Zc3h8Q9JJ48 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Zc3h8Q9JJ48 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Zc3h8Q9JJ48 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Zc3h8Q9JJ48 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Zc3h8Q9JJ48 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Zc3h8Q9JJ48 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc3h8Q9JJ48 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Zc3h8Q9JJ48 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Zc3h8Q9JJ48 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.53■■□□□ 1.04
Zc3h8Q9JJ48 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Zc3h8Q9JJ48 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.53■■□□□ 1.04
Zc3h8Q9JJ48 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.53■■□□□ 1.04
Zc3h8Q9JJ48 Mir3960-201ENSMUST00000198213 73 ntBASIC21.53■■□□□ 1.04
Zc3h8Q9JJ48 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Zc3h8Q9JJ48 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Zc3h8Q9JJ48 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Zc3h8Q9JJ48 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.52■■□□□ 1.04
Zc3h8Q9JJ48 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Zc3h8Q9JJ48 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Zc3h8Q9JJ48 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3h8Q9JJ48 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3h8Q9JJ48 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Zc3h8Q9JJ48 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.5■■□□□ 1.03
Zc3h8Q9JJ48 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3h8Q9JJ48 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Zc3h8Q9JJ48 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3h8Q9JJ48 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3h8Q9JJ48 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.49■■□□□ 1.03
Zc3h8Q9JJ48 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3h8Q9JJ48 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Zc3h8Q9JJ48 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3h8Q9JJ48 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3h8Q9JJ48 Gm45364-201ENSMUST00000210883 159 ntBASIC21.48■■□□□ 1.03
Zc3h8Q9JJ48 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Zc3h8Q9JJ48 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h8Q9JJ48 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h8Q9JJ48 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h8Q9JJ48 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.47■■□□□ 1.03
Zc3h8Q9JJ48 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h8Q9JJ48 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h8Q9JJ48 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.46■■□□□ 1.03
Zc3h8Q9JJ48 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h8Q9JJ48 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.45■■□□□ 1.02
Zc3h8Q9JJ48 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h8Q9JJ48 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h8Q9JJ48 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h8Q9JJ48 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h8Q9JJ48 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
Zc3h8Q9JJ48 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h8Q9JJ48 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h8Q9JJ48 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h8Q9JJ48 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h8Q9JJ48 Gm11175-201ENSMUST00000116172 543 ntBASIC21.42■■□□□ 1.02
Zc3h8Q9JJ48 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.42■■□□□ 1.02
Zc3h8Q9JJ48 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h8Q9JJ48 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h8Q9JJ48 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h8Q9JJ48 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h8Q9JJ48 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Zc3h8Q9JJ48 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Zc3h8Q9JJ48 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Zc3h8Q9JJ48 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h8Q9JJ48 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h8Q9JJ48 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Zc3h8Q9JJ48 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h8Q9JJ48 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h8Q9JJ48 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
Zc3h8Q9JJ48 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h8Q9JJ48 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
Zc3h8Q9JJ48 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h8Q9JJ48 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Zc3h8Q9JJ48 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.37■■□□□ 1.01
Zc3h8Q9JJ48 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Zc3h8Q9JJ48 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Zc3h8Q9JJ48 Gm9812-201ENSMUST00000061934 968 ntBASIC21.37■■□□□ 1.01
Zc3h8Q9JJ48 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h8Q9JJ48 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h8Q9JJ48 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.36■■□□□ 1.01
Zc3h8Q9JJ48 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Zc3h8Q9JJ48 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h8Q9JJ48 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Zc3h8Q9JJ48 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.35■■□□□ 1.01
Zc3h8Q9JJ48 Mir6538-201ENSMUST00000183713 110 ntBASIC21.35■■□□□ 1.01
Zc3h8Q9JJ48 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h8Q9JJ48 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Zc3h8Q9JJ48 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms