Protein–RNA interactions for Protein: Q9ERE8

Tlnrd1, Talin rod domain-containing protein 1, mousemouse

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlnrd1Q9ERE8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tlnrd1Q9ERE8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Tlnrd1Q9ERE8 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tlnrd1Q9ERE8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Tlnrd1Q9ERE8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tlnrd1Q9ERE8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tlnrd1Q9ERE8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tlnrd1Q9ERE8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Tlnrd1Q9ERE8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Tlnrd1Q9ERE8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tlnrd1Q9ERE8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tlnrd1Q9ERE8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tlnrd1Q9ERE8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.43■□□□□ 0.7
Tlnrd1Q9ERE8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlnrd1Q9ERE8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tlnrd1Q9ERE8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tlnrd1Q9ERE8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tlnrd1Q9ERE8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tlnrd1Q9ERE8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlnrd1Q9ERE8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlnrd1Q9ERE8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tlnrd1Q9ERE8 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tlnrd1Q9ERE8 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.39■□□□□ 0.69
Tlnrd1Q9ERE8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tlnrd1Q9ERE8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.39■□□□□ 0.69
Tlnrd1Q9ERE8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tlnrd1Q9ERE8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Tlnrd1Q9ERE8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlnrd1Q9ERE8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tlnrd1Q9ERE8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tlnrd1Q9ERE8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tlnrd1Q9ERE8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tlnrd1Q9ERE8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tlnrd1Q9ERE8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tlnrd1Q9ERE8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Tlnrd1Q9ERE8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tlnrd1Q9ERE8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tlnrd1Q9ERE8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms