Protein–RNA interactions for Protein: Q9EPU5

Tnfrsf21, Tumor necrosis factor receptor superfamily member 21, mousemouse

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf21Q9EPU5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tnfrsf21Q9EPU5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Tnfrsf21Q9EPU5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
Tnfrsf21Q9EPU5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Tnfrsf21Q9EPU5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf21Q9EPU5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf21Q9EPU5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
Tnfrsf21Q9EPU5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tnfrsf21Q9EPU5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf21Q9EPU5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf21Q9EPU5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tnfrsf21Q9EPU5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.5■■□□□ 1.03
Tnfrsf21Q9EPU5 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.5■■□□□ 1.03
Tnfrsf21Q9EPU5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tnfrsf21Q9EPU5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Tnfrsf21Q9EPU5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Tnfrsf21Q9EPU5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf21Q9EPU5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Tnfrsf21Q9EPU5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.48■■□□□ 1.03
Tnfrsf21Q9EPU5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.48■■□□□ 1.03
Tnfrsf21Q9EPU5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
Tnfrsf21Q9EPU5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf21Q9EPU5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.47■■□□□ 1.03
Tnfrsf21Q9EPU5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf21Q9EPU5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Tnfrsf21Q9EPU5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf21Q9EPU5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tnfrsf21Q9EPU5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf21Q9EPU5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Tnfrsf21Q9EPU5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Tnfrsf21Q9EPU5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.46■■□□□ 1.03
Tnfrsf21Q9EPU5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.46■■□□□ 1.03
Tnfrsf21Q9EPU5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tnfrsf21Q9EPU5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf21Q9EPU5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.45■■□□□ 1.02
Tnfrsf21Q9EPU5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Tnfrsf21Q9EPU5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Tnfrsf21Q9EPU5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Tnfrsf21Q9EPU5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.44■■□□□ 1.02
Tnfrsf21Q9EPU5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Tnfrsf21Q9EPU5 Gm6821-201ENSMUST00000107540 542 ntBASIC21.43■■□□□ 1.02
Tnfrsf21Q9EPU5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf21Q9EPU5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf21Q9EPU5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnfrsf21Q9EPU5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
Tnfrsf21Q9EPU5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf21Q9EPU5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf21Q9EPU5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Tnfrsf21Q9EPU5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf21Q9EPU5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnfrsf21Q9EPU5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf21Q9EPU5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf21Q9EPU5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnfrsf21Q9EPU5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnfrsf21Q9EPU5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.37■■□□□ 1.01
Tnfrsf21Q9EPU5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Tnfrsf21Q9EPU5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnfrsf21Q9EPU5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.37■■□□□ 1.01
Tnfrsf21Q9EPU5 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.36■■□□□ 1.01
Tnfrsf21Q9EPU5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnfrsf21Q9EPU5 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.35■■□□□ 1.01
Tnfrsf21Q9EPU5 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf21Q9EPU5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnfrsf21Q9EPU5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Tnfrsf21Q9EPU5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Tnfrsf21Q9EPU5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnfrsf21Q9EPU5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf21Q9EPU5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnfrsf21Q9EPU5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tnfrsf21Q9EPU5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Tnfrsf21Q9EPU5 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tnfrsf21Q9EPU5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tnfrsf21Q9EPU5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf21Q9EPU5 Gm8503-201ENSMUST00000118131 455 ntBASIC21.31■■□□□ 1
Tnfrsf21Q9EPU5 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.31■■□□□ 1
Tnfrsf21Q9EPU5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.31■■□□□ 1
Tnfrsf21Q9EPU5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.31■■□□□ 1
Tnfrsf21Q9EPU5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Tnfrsf21Q9EPU5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf21Q9EPU5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnfrsf21Q9EPU5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf21Q9EPU5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf21Q9EPU5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf21Q9EPU5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.29■■□□□ 1
Tnfrsf21Q9EPU5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf21Q9EPU5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnfrsf21Q9EPU5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf21Q9EPU5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Tnfrsf21Q9EPU5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.27■■□□□ 1
Tnfrsf21Q9EPU5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Tnfrsf21Q9EPU5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf21Q9EPU5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf21Q9EPU5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tnfrsf21Q9EPU5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tnfrsf21Q9EPU5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tnfrsf21Q9EPU5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.26■□□□□ 0.99
Tnfrsf21Q9EPU5 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.26■□□□□ 0.99
Tnfrsf21Q9EPU5 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.26■□□□□ 0.99
Tnfrsf21Q9EPU5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tnfrsf21Q9EPU5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms