Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ndufa11Q9D8B4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ndufa11Q9D8B4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ndufa11Q9D8B4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ndufa11Q9D8B4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ndufa11Q9D8B4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ndufa11Q9D8B4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.6■□□□□ 0.89
Ndufa11Q9D8B4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ndufa11Q9D8B4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ndufa11Q9D8B4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ndufa11Q9D8B4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.59■□□□□ 0.89
Ndufa11Q9D8B4 Gm9812-201ENSMUST00000061934 968 ntBASIC20.59■□□□□ 0.89
Ndufa11Q9D8B4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ndufa11Q9D8B4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ndufa11Q9D8B4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ndufa11Q9D8B4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ndufa11Q9D8B4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
Ndufa11Q9D8B4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndufa11Q9D8B4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndufa11Q9D8B4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ndufa11Q9D8B4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ndufa11Q9D8B4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.56■□□□□ 0.88
Ndufa11Q9D8B4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ndufa11Q9D8B4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ndufa11Q9D8B4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.56■□□□□ 0.88
Ndufa11Q9D8B4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ndufa11Q9D8B4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.55■□□□□ 0.88
Ndufa11Q9D8B4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ndufa11Q9D8B4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndufa11Q9D8B4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ndufa11Q9D8B4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.54■□□□□ 0.88
Ndufa11Q9D8B4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndufa11Q9D8B4 Gm5812-201ENSMUST00000061073 957 ntBASIC20.54■□□□□ 0.88
Ndufa11Q9D8B4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ndufa11Q9D8B4 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ndufa11Q9D8B4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndufa11Q9D8B4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndufa11Q9D8B4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.53■□□□□ 0.88
Ndufa11Q9D8B4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndufa11Q9D8B4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndufa11Q9D8B4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ndufa11Q9D8B4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ndufa11Q9D8B4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ndufa11Q9D8B4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ndufa11Q9D8B4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ndufa11Q9D8B4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.51■□□□□ 0.87
Ndufa11Q9D8B4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ndufa11Q9D8B4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.5■□□□□ 0.87
Ndufa11Q9D8B4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ndufa11Q9D8B4 Gm5921-201ENSMUST00000075898 882 ntBASIC20.5■□□□□ 0.87
Ndufa11Q9D8B4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ndufa11Q9D8B4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ndufa11Q9D8B4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ndufa11Q9D8B4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndufa11Q9D8B4 Gm15039-201ENSMUST00000118914 875 ntBASIC20.49■□□□□ 0.87
Ndufa11Q9D8B4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ndufa11Q9D8B4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndufa11Q9D8B4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndufa11Q9D8B4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ndufa11Q9D8B4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndufa11Q9D8B4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndufa11Q9D8B4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.47■□□□□ 0.87
Ndufa11Q9D8B4 Gm22567-201ENSMUST00000175542 342 ntBASIC20.47■□□□□ 0.87
Ndufa11Q9D8B4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ndufa11Q9D8B4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndufa11Q9D8B4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ndufa11Q9D8B4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ndufa11Q9D8B4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndufa11Q9D8B4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.44■□□□□ 0.86
Ndufa11Q9D8B4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndufa11Q9D8B4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.44■□□□□ 0.86
Ndufa11Q9D8B4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ndufa11Q9D8B4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ndufa11Q9D8B4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndufa11Q9D8B4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndufa11Q9D8B4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndufa11Q9D8B4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ndufa11Q9D8B4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.42■□□□□ 0.86
Ndufa11Q9D8B4 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndufa11Q9D8B4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndufa11Q9D8B4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.41■□□□□ 0.86
Ndufa11Q9D8B4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Ndufa11Q9D8B4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.41■□□□□ 0.86
Ndufa11Q9D8B4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.4■□□□□ 0.86
Ndufa11Q9D8B4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.4■□□□□ 0.86
Ndufa11Q9D8B4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndufa11Q9D8B4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Ndufa11Q9D8B4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ndufa11Q9D8B4 Terc-201ENSMUST00000082862 423 ntBASIC20.39■□□□□ 0.85
Ndufa11Q9D8B4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ndufa11Q9D8B4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Ndufa11Q9D8B4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ndufa11Q9D8B4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms