Protein–RNA interactions for Protein: Q9D1H8

Mrpl53, 39S ribosomal protein L53, mitochondrial, mousemouse

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl53Q9D1H8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Mrpl53Q9D1H8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.39■□□□□ 0.37
Mrpl53Q9D1H8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mrpl53Q9D1H8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl53Q9D1H8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mrpl53Q9D1H8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mrpl53Q9D1H8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.37■□□□□ 0.37
Mrpl53Q9D1H8 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.37■□□□□ 0.37
Mrpl53Q9D1H8 Zfp131-205ENSMUST00000223812 663 ntBASIC17.37■□□□□ 0.37
Mrpl53Q9D1H8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mrpl53Q9D1H8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Mrpl53Q9D1H8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl53Q9D1H8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.36■□□□□ 0.37
Mrpl53Q9D1H8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.36■□□□□ 0.37
Mrpl53Q9D1H8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mrpl53Q9D1H8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Mrpl53Q9D1H8 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.34■□□□□ 0.37
Mrpl53Q9D1H8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mrpl53Q9D1H8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.34■□□□□ 0.37
Mrpl53Q9D1H8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl53Q9D1H8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mrpl53Q9D1H8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Mrpl53Q9D1H8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mrpl53Q9D1H8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Mrpl53Q9D1H8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl53Q9D1H8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mrpl53Q9D1H8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Mrpl53Q9D1H8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Mrpl53Q9D1H8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mrpl53Q9D1H8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.32■□□□□ 0.36
Mrpl53Q9D1H8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
Mrpl53Q9D1H8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrpl53Q9D1H8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.31■□□□□ 0.36
Mrpl53Q9D1H8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrpl53Q9D1H8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrpl53Q9D1H8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mrpl53Q9D1H8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.31■□□□□ 0.36
Mrpl53Q9D1H8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Mrpl53Q9D1H8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrpl53Q9D1H8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.3■□□□□ 0.36
Mrpl53Q9D1H8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrpl53Q9D1H8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mrpl53Q9D1H8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl53Q9D1H8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl53Q9D1H8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl53Q9D1H8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl53Q9D1H8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.29■□□□□ 0.36
Mrpl53Q9D1H8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrpl53Q9D1H8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.29■□□□□ 0.36
Mrpl53Q9D1H8 Gm9397-201ENSMUST00000200125 605 ntBASIC17.28■□□□□ 0.36
Mrpl53Q9D1H8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl53Q9D1H8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl53Q9D1H8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrpl53Q9D1H8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl53Q9D1H8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl53Q9D1H8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrpl53Q9D1H8 Gm24970-201ENSMUST00000175582 82 ntBASIC17.27■□□□□ 0.36
Mrpl53Q9D1H8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.27■□□□□ 0.36
Mrpl53Q9D1H8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mrpl53Q9D1H8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl53Q9D1H8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl53Q9D1H8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl53Q9D1H8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl53Q9D1H8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrpl53Q9D1H8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrpl53Q9D1H8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.24■□□□□ 0.35
Mrpl53Q9D1H8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl53Q9D1H8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl53Q9D1H8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrpl53Q9D1H8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl53Q9D1H8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl53Q9D1H8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl53Q9D1H8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl53Q9D1H8 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.23■□□□□ 0.35
Mrpl53Q9D1H8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl53Q9D1H8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Mrpl53Q9D1H8 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl53Q9D1H8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Mrpl53Q9D1H8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl53Q9D1H8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl53Q9D1H8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl53Q9D1H8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Mrpl53Q9D1H8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Mrpl53Q9D1H8 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.21■□□□□ 0.35
Mrpl53Q9D1H8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms