Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Raet1eQ9CZQ6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1eQ9CZQ6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1eQ9CZQ6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1eQ9CZQ6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1eQ9CZQ6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1eQ9CZQ6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1eQ9CZQ6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Raet1eQ9CZQ6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1eQ9CZQ6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1eQ9CZQ6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1eQ9CZQ6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1eQ9CZQ6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1eQ9CZQ6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1eQ9CZQ6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Raet1eQ9CZQ6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1eQ9CZQ6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1eQ9CZQ6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1eQ9CZQ6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1eQ9CZQ6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1eQ9CZQ6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1eQ9CZQ6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Raet1eQ9CZQ6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.43■□□□□ 0.86
Raet1eQ9CZQ6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Raet1eQ9CZQ6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Raet1eQ9CZQ6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Raet1eQ9CZQ6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Raet1eQ9CZQ6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1eQ9CZQ6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Raet1eQ9CZQ6 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.42■□□□□ 0.86
Raet1eQ9CZQ6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Raet1eQ9CZQ6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Raet1eQ9CZQ6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raet1eQ9CZQ6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raet1eQ9CZQ6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Raet1eQ9CZQ6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1eQ9CZQ6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1eQ9CZQ6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Raet1eQ9CZQ6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Raet1eQ9CZQ6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Raet1eQ9CZQ6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Raet1eQ9CZQ6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1eQ9CZQ6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1eQ9CZQ6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Raet1eQ9CZQ6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1eQ9CZQ6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Raet1eQ9CZQ6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1eQ9CZQ6 Particl-201ENSMUST00000205370 1560 ntBASIC20.37■□□□□ 0.85
Raet1eQ9CZQ6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Raet1eQ9CZQ6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.37■□□□□ 0.85
Raet1eQ9CZQ6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1eQ9CZQ6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1eQ9CZQ6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.36■□□□□ 0.85
Raet1eQ9CZQ6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1eQ9CZQ6 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.36■□□□□ 0.85
Raet1eQ9CZQ6 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.36■□□□□ 0.85
Raet1eQ9CZQ6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Raet1eQ9CZQ6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1eQ9CZQ6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1eQ9CZQ6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1eQ9CZQ6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1eQ9CZQ6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Raet1eQ9CZQ6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Raet1eQ9CZQ6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1eQ9CZQ6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1eQ9CZQ6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Raet1eQ9CZQ6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.33■□□□□ 0.85
Raet1eQ9CZQ6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1eQ9CZQ6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Raet1eQ9CZQ6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Raet1eQ9CZQ6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Raet1eQ9CZQ6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1eQ9CZQ6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Raet1eQ9CZQ6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1eQ9CZQ6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Raet1eQ9CZQ6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1eQ9CZQ6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Raet1eQ9CZQ6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1eQ9CZQ6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1eQ9CZQ6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1eQ9CZQ6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1eQ9CZQ6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1eQ9CZQ6 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.31■□□□□ 0.84
Raet1eQ9CZQ6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Raet1eQ9CZQ6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1eQ9CZQ6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Raet1eQ9CZQ6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1eQ9CZQ6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Raet1eQ9CZQ6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1eQ9CZQ6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1eQ9CZQ6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Raet1eQ9CZQ6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1eQ9CZQ6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Raet1eQ9CZQ6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Raet1eQ9CZQ6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Raet1eQ9CZQ6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Raet1eQ9CZQ6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1eQ9CZQ6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Raet1eQ9CZQ6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.28■□□□□ 0.84
Raet1eQ9CZQ6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms