Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Hcfc1r1Q9CYQ5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Hcfc1r1Q9CYQ5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Hcfc1r1Q9CYQ5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.16■□□□□ 0.82
Hcfc1r1Q9CYQ5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcfc1r1Q9CYQ5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Hcfc1r1Q9CYQ5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Hcfc1r1Q9CYQ5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcfc1r1Q9CYQ5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcfc1r1Q9CYQ5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Hcfc1r1Q9CYQ5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Hcfc1r1Q9CYQ5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Hcfc1r1Q9CYQ5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Hcfc1r1Q9CYQ5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1r1Q9CYQ5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1r1Q9CYQ5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1r1Q9CYQ5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Hcfc1r1Q9CYQ5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc1r1Q9CYQ5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.12■□□□□ 0.81
Hcfc1r1Q9CYQ5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Hcfc1r1Q9CYQ5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc1r1Q9CYQ5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc1r1Q9CYQ5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Hcfc1r1Q9CYQ5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcfc1r1Q9CYQ5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcfc1r1Q9CYQ5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Hcfc1r1Q9CYQ5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcfc1r1Q9CYQ5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Hcfc1r1Q9CYQ5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Hcfc1r1Q9CYQ5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Hcfc1r1Q9CYQ5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Hcfc1r1Q9CYQ5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Hcfc1r1Q9CYQ5 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcfc1r1Q9CYQ5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcfc1r1Q9CYQ5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hcfc1r1Q9CYQ5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Hcfc1r1Q9CYQ5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcfc1r1Q9CYQ5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hcfc1r1Q9CYQ5 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.07■□□□□ 0.8
Hcfc1r1Q9CYQ5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hcfc1r1Q9CYQ5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.05■□□□□ 0.8
Hcfc1r1Q9CYQ5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.04■□□□□ 0.8
Hcfc1r1Q9CYQ5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hcfc1r1Q9CYQ5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hcfc1r1Q9CYQ5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Hcfc1r1Q9CYQ5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hcfc1r1Q9CYQ5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hcfc1r1Q9CYQ5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1r1Q9CYQ5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1r1Q9CYQ5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hcfc1r1Q9CYQ5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1r1Q9CYQ5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Hcfc1r1Q9CYQ5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hcfc1r1Q9CYQ5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcfc1r1Q9CYQ5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Hcfc1r1Q9CYQ5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hcfc1r1Q9CYQ5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hcfc1r1Q9CYQ5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hcfc1r1Q9CYQ5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcfc1r1Q9CYQ5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hcfc1r1Q9CYQ5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hcfc1r1Q9CYQ5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Hcfc1r1Q9CYQ5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hcfc1r1Q9CYQ5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20■□□□□ 0.79
Hcfc1r1Q9CYQ5 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20■□□□□ 0.79
Hcfc1r1Q9CYQ5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Hcfc1r1Q9CYQ5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Hcfc1r1Q9CYQ5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Hcfc1r1Q9CYQ5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcfc1r1Q9CYQ5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.99■□□□□ 0.79
Hcfc1r1Q9CYQ5 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.99■□□□□ 0.79
Hcfc1r1Q9CYQ5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Hcfc1r1Q9CYQ5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Hcfc1r1Q9CYQ5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc1r1Q9CYQ5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Hcfc1r1Q9CYQ5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc1r1Q9CYQ5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Hcfc1r1Q9CYQ5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcfc1r1Q9CYQ5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcfc1r1Q9CYQ5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcfc1r1Q9CYQ5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Hcfc1r1Q9CYQ5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Hcfc1r1Q9CYQ5 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms