Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Rpusd4Q9CWX4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpusd4Q9CWX4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpusd4Q9CWX4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpusd4Q9CWX4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rpusd4Q9CWX4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Rpusd4Q9CWX4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.37■□□□□ 0.69
Rpusd4Q9CWX4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Rpusd4Q9CWX4 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.36■□□□□ 0.69
Rpusd4Q9CWX4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rpusd4Q9CWX4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.35■□□□□ 0.69
Rpusd4Q9CWX4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpusd4Q9CWX4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.34■□□□□ 0.69
Rpusd4Q9CWX4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rpusd4Q9CWX4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rpusd4Q9CWX4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rpusd4Q9CWX4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rpusd4Q9CWX4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpusd4Q9CWX4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.32■□□□□ 0.68
Rpusd4Q9CWX4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rpusd4Q9CWX4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpusd4Q9CWX4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.31■□□□□ 0.68
Rpusd4Q9CWX4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpusd4Q9CWX4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.31■□□□□ 0.68
Rpusd4Q9CWX4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpusd4Q9CWX4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpusd4Q9CWX4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpusd4Q9CWX4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rpusd4Q9CWX4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpusd4Q9CWX4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rpusd4Q9CWX4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpusd4Q9CWX4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpusd4Q9CWX4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpusd4Q9CWX4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpusd4Q9CWX4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rpusd4Q9CWX4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpusd4Q9CWX4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rpusd4Q9CWX4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpusd4Q9CWX4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpusd4Q9CWX4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpusd4Q9CWX4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rpusd4Q9CWX4 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpusd4Q9CWX4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpusd4Q9CWX4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpusd4Q9CWX4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpusd4Q9CWX4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpusd4Q9CWX4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpusd4Q9CWX4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.25■□□□□ 0.67
Rpusd4Q9CWX4 Gm30023-201ENSMUST00000197970 889 ntBASIC19.25■□□□□ 0.67
Rpusd4Q9CWX4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpusd4Q9CWX4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Rpusd4Q9CWX4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpusd4Q9CWX4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpusd4Q9CWX4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.24■□□□□ 0.67
Rpusd4Q9CWX4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpusd4Q9CWX4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpusd4Q9CWX4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rpusd4Q9CWX4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.23■□□□□ 0.67
Rpusd4Q9CWX4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpusd4Q9CWX4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpusd4Q9CWX4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rpusd4Q9CWX4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpusd4Q9CWX4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Rpusd4Q9CWX4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Rpusd4Q9CWX4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Rpusd4Q9CWX4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.2■□□□□ 0.66
Rpusd4Q9CWX4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rpusd4Q9CWX4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpusd4Q9CWX4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.19■□□□□ 0.66
Rpusd4Q9CWX4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpusd4Q9CWX4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpusd4Q9CWX4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpusd4Q9CWX4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpusd4Q9CWX4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpusd4Q9CWX4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rpusd4Q9CWX4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpusd4Q9CWX4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpusd4Q9CWX4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms