Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Rnf135Q9CWS1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf135Q9CWS1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rnf135Q9CWS1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rnf135Q9CWS1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rnf135Q9CWS1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf135Q9CWS1 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf135Q9CWS1 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf135Q9CWS1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf135Q9CWS1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf135Q9CWS1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rnf135Q9CWS1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.14■■□□□ 1.46
Rnf135Q9CWS1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rnf135Q9CWS1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.14■■□□□ 1.45
Rnf135Q9CWS1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rnf135Q9CWS1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Rnf135Q9CWS1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.13■■□□□ 1.45
Rnf135Q9CWS1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Rnf135Q9CWS1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rnf135Q9CWS1 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.13■■□□□ 1.45
Rnf135Q9CWS1 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.13■■□□□ 1.45
Rnf135Q9CWS1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Rnf135Q9CWS1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Rnf135Q9CWS1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.12■■□□□ 1.45
Rnf135Q9CWS1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Rnf135Q9CWS1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf135Q9CWS1 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf135Q9CWS1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rnf135Q9CWS1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rnf135Q9CWS1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rnf135Q9CWS1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
Rnf135Q9CWS1 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.08■■□□□ 1.45
Rnf135Q9CWS1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Rnf135Q9CWS1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf135Q9CWS1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
Rnf135Q9CWS1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf135Q9CWS1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf135Q9CWS1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf135Q9CWS1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rnf135Q9CWS1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf135Q9CWS1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Rnf135Q9CWS1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf135Q9CWS1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rnf135Q9CWS1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Rnf135Q9CWS1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf135Q9CWS1 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Rnf135Q9CWS1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
Rnf135Q9CWS1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf135Q9CWS1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Rnf135Q9CWS1 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf135Q9CWS1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rnf135Q9CWS1 Particl-201ENSMUST00000205370 1560 ntBASIC24.03■■□□□ 1.44
Rnf135Q9CWS1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Rnf135Q9CWS1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf135Q9CWS1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf135Q9CWS1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf135Q9CWS1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Rnf135Q9CWS1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rnf135Q9CWS1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Rnf135Q9CWS1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Rnf135Q9CWS1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf135Q9CWS1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Rnf135Q9CWS1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.98■■□□□ 1.43
Rnf135Q9CWS1 Nkain2-201ENSMUST00000092602 558 ntBASIC23.98■■□□□ 1.43
Rnf135Q9CWS1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Rnf135Q9CWS1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf135Q9CWS1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
Rnf135Q9CWS1 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf135Q9CWS1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Rnf135Q9CWS1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Rnf135Q9CWS1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf135Q9CWS1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.95■■□□□ 1.42
Rnf135Q9CWS1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf135Q9CWS1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Rnf135Q9CWS1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Rnf135Q9CWS1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Rnf135Q9CWS1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf135Q9CWS1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.93■■□□□ 1.42
Rnf135Q9CWS1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.93■■□□□ 1.42
Rnf135Q9CWS1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.93■■□□□ 1.42
Rnf135Q9CWS1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Rnf135Q9CWS1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf135Q9CWS1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.92■■□□□ 1.42
Rnf135Q9CWS1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf135Q9CWS1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf135Q9CWS1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.92■■□□□ 1.42
Rnf135Q9CWS1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Rnf135Q9CWS1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Rnf135Q9CWS1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Rnf135Q9CWS1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf135Q9CWS1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rnf135Q9CWS1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rnf135Q9CWS1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.89■■□□□ 1.42
Rnf135Q9CWS1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Rnf135Q9CWS1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
Rnf135Q9CWS1 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Rnf135Q9CWS1 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rnf135Q9CWS1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rnf135Q9CWS1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rnf135Q9CWS1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms