Protein–RNA interactions for Protein: Q9CQJ4

Rnf2, E3 ubiquitin-protein ligase RING2, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf2Q9CQJ4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf2Q9CQJ4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.46■□□□□ 0.55
Rnf2Q9CQJ4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf2Q9CQJ4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf2Q9CQJ4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf2Q9CQJ4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf2Q9CQJ4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rnf2Q9CQJ4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Rnf2Q9CQJ4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rnf2Q9CQJ4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf2Q9CQJ4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf2Q9CQJ4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf2Q9CQJ4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf2Q9CQJ4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rnf2Q9CQJ4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf2Q9CQJ4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf2Q9CQJ4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Rnf2Q9CQJ4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf2Q9CQJ4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf2Q9CQJ4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf2Q9CQJ4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf2Q9CQJ4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf2Q9CQJ4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf2Q9CQJ4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf2Q9CQJ4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rnf2Q9CQJ4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rnf2Q9CQJ4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf2Q9CQJ4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rnf2Q9CQJ4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf2Q9CQJ4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf2Q9CQJ4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf2Q9CQJ4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf2Q9CQJ4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf2Q9CQJ4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf2Q9CQJ4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.37■□□□□ 0.53
Rnf2Q9CQJ4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf2Q9CQJ4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Rnf2Q9CQJ4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf2Q9CQJ4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf2Q9CQJ4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf2Q9CQJ4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Rnf2Q9CQJ4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf2Q9CQJ4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rnf2Q9CQJ4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf2Q9CQJ4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rnf2Q9CQJ4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Rnf2Q9CQJ4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf2Q9CQJ4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf2Q9CQJ4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf2Q9CQJ4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rnf2Q9CQJ4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Rnf2Q9CQJ4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rnf2Q9CQJ4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rnf2Q9CQJ4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf2Q9CQJ4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf2Q9CQJ4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf2Q9CQJ4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rnf2Q9CQJ4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.3■□□□□ 0.52
Rnf2Q9CQJ4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf2Q9CQJ4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf2Q9CQJ4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.29■□□□□ 0.52
Rnf2Q9CQJ4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf2Q9CQJ4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rnf2Q9CQJ4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf2Q9CQJ4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf2Q9CQJ4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf2Q9CQJ4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rnf2Q9CQJ4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms