Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1Q9CQ70 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
H2afb1Q9CQ70 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
H2afb1Q9CQ70 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1Q9CQ70 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1Q9CQ70 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1Q9CQ70 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
H2afb1Q9CQ70 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
H2afb1Q9CQ70 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1Q9CQ70 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1Q9CQ70 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
H2afb1Q9CQ70 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1Q9CQ70 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
H2afb1Q9CQ70 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.96■□□□□ 0.63
H2afb1Q9CQ70 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1Q9CQ70 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1Q9CQ70 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
H2afb1Q9CQ70 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1Q9CQ70 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1Q9CQ70 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
H2afb1Q9CQ70 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1Q9CQ70 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2afb1Q9CQ70 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
H2afb1Q9CQ70 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
H2afb1Q9CQ70 Nkain2-201ENSMUST00000092602 558 ntBASIC18.94■□□□□ 0.62
H2afb1Q9CQ70 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
H2afb1Q9CQ70 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1Q9CQ70 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1Q9CQ70 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
H2afb1Q9CQ70 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1Q9CQ70 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1Q9CQ70 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
H2afb1Q9CQ70 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
H2afb1Q9CQ70 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb1Q9CQ70 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
H2afb1Q9CQ70 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
H2afb1Q9CQ70 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.9■□□□□ 0.62
H2afb1Q9CQ70 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
H2afb1Q9CQ70 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
H2afb1Q9CQ70 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
H2afb1Q9CQ70 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.89■□□□□ 0.61
H2afb1Q9CQ70 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1Q9CQ70 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.88■□□□□ 0.61
H2afb1Q9CQ70 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
H2afb1Q9CQ70 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
H2afb1Q9CQ70 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
H2afb1Q9CQ70 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb1Q9CQ70 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
H2afb1Q9CQ70 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.85■□□□□ 0.61
H2afb1Q9CQ70 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
H2afb1Q9CQ70 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
H2afb1Q9CQ70 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
H2afb1Q9CQ70 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1Q9CQ70 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1Q9CQ70 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.82■□□□□ 0.6
H2afb1Q9CQ70 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1Q9CQ70 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
H2afb1Q9CQ70 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
H2afb1Q9CQ70 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1Q9CQ70 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb1Q9CQ70 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1Q9CQ70 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1Q9CQ70 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb1Q9CQ70 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.8■□□□□ 0.6
H2afb1Q9CQ70 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
H2afb1Q9CQ70 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1Q9CQ70 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
H2afb1Q9CQ70 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1Q9CQ70 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
H2afb1Q9CQ70 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H2afb1Q9CQ70 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1Q9CQ70 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H2afb1Q9CQ70 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1Q9CQ70 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1Q9CQ70 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1Q9CQ70 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1Q9CQ70 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H2afb1Q9CQ70 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.76■□□□□ 0.59
H2afb1Q9CQ70 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
H2afb1Q9CQ70 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1Q9CQ70 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1Q9CQ70 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H2afb1Q9CQ70 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms