Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Rnf111Q99ML9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rnf111Q99ML9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf111Q99ML9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf111Q99ML9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf111Q99ML9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rnf111Q99ML9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rnf111Q99ML9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.49■■□□□ 1.19
Rnf111Q99ML9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Rnf111Q99ML9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Rnf111Q99ML9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
Rnf111Q99ML9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Rnf111Q99ML9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf111Q99ML9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf111Q99ML9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rnf111Q99ML9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Rnf111Q99ML9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf111Q99ML9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf111Q99ML9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Rnf111Q99ML9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Rnf111Q99ML9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf111Q99ML9 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.45■■□□□ 1.18
Rnf111Q99ML9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf111Q99ML9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf111Q99ML9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rnf111Q99ML9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Rnf111Q99ML9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf111Q99ML9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rnf111Q99ML9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Rnf111Q99ML9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf111Q99ML9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf111Q99ML9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf111Q99ML9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf111Q99ML9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rnf111Q99ML9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Rnf111Q99ML9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rnf111Q99ML9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.41■■□□□ 1.18
Rnf111Q99ML9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf111Q99ML9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.4■■□□□ 1.18
Rnf111Q99ML9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf111Q99ML9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf111Q99ML9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Rnf111Q99ML9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf111Q99ML9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf111Q99ML9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf111Q99ML9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf111Q99ML9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.39■■□□□ 1.17
Rnf111Q99ML9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf111Q99ML9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf111Q99ML9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf111Q99ML9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.38■■□□□ 1.17
Rnf111Q99ML9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rnf111Q99ML9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.38■■□□□ 1.17
Rnf111Q99ML9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.38■■□□□ 1.17
Rnf111Q99ML9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf111Q99ML9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Rnf111Q99ML9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.37■■□□□ 1.17
Rnf111Q99ML9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf111Q99ML9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf111Q99ML9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rnf111Q99ML9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf111Q99ML9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Rnf111Q99ML9 Gm30023-201ENSMUST00000197970 889 ntBASIC22.36■■□□□ 1.17
Rnf111Q99ML9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf111Q99ML9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf111Q99ML9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf111Q99ML9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Rnf111Q99ML9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf111Q99ML9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf111Q99ML9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf111Q99ML9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Rnf111Q99ML9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Rnf111Q99ML9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf111Q99ML9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf111Q99ML9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rnf111Q99ML9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf111Q99ML9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
Rnf111Q99ML9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf111Q99ML9 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.33■■□□□ 1.17
Rnf111Q99ML9 Nkain2-201ENSMUST00000092602 558 ntBASIC22.33■■□□□ 1.17
Rnf111Q99ML9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf111Q99ML9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Rnf111Q99ML9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Rnf111Q99ML9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.32■■□□□ 1.16
Rnf111Q99ML9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf111Q99ML9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Rnf111Q99ML9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Rnf111Q99ML9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rnf111Q99ML9 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.3■■□□□ 1.16
Rnf111Q99ML9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Rnf111Q99ML9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
Rnf111Q99ML9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Rnf111Q99ML9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.29■■□□□ 1.16
Rnf111Q99ML9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf111Q99ML9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Rnf111Q99ML9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf111Q99ML9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rnf111Q99ML9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Rnf111Q99ML9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Rnf111Q99ML9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms