Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Thumpd1Q99J36 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd1Q99J36 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd1Q99J36 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.69■□□□□ 0.9
Thumpd1Q99J36 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Thumpd1Q99J36 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.68■□□□□ 0.9
Thumpd1Q99J36 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Thumpd1Q99J36 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Thumpd1Q99J36 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
Thumpd1Q99J36 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd1Q99J36 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd1Q99J36 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Thumpd1Q99J36 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd1Q99J36 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Thumpd1Q99J36 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Thumpd1Q99J36 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thumpd1Q99J36 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Thumpd1Q99J36 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Thumpd1Q99J36 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Thumpd1Q99J36 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Thumpd1Q99J36 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.64■□□□□ 0.89
Thumpd1Q99J36 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Thumpd1Q99J36 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.62■□□□□ 0.89
Thumpd1Q99J36 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd1Q99J36 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Thumpd1Q99J36 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.61■□□□□ 0.89
Thumpd1Q99J36 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd1Q99J36 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd1Q99J36 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Thumpd1Q99J36 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Thumpd1Q99J36 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Thumpd1Q99J36 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.6■□□□□ 0.89
Thumpd1Q99J36 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd1Q99J36 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd1Q99J36 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd1Q99J36 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd1Q99J36 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Thumpd1Q99J36 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd1Q99J36 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Thumpd1Q99J36 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd1Q99J36 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd1Q99J36 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Thumpd1Q99J36 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Thumpd1Q99J36 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.58■□□□□ 0.88
Thumpd1Q99J36 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd1Q99J36 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd1Q99J36 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd1Q99J36 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd1Q99J36 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd1Q99J36 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Thumpd1Q99J36 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.56■□□□□ 0.88
Thumpd1Q99J36 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd1Q99J36 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd1Q99J36 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd1Q99J36 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd1Q99J36 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Thumpd1Q99J36 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd1Q99J36 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd1Q99J36 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Thumpd1Q99J36 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd1Q99J36 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Thumpd1Q99J36 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thumpd1Q99J36 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Thumpd1Q99J36 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Thumpd1Q99J36 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.54■□□□□ 0.88
Thumpd1Q99J36 Gm30023-201ENSMUST00000197970 889 ntBASIC20.53■□□□□ 0.88
Thumpd1Q99J36 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.53■□□□□ 0.88
Thumpd1Q99J36 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Thumpd1Q99J36 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Thumpd1Q99J36 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Thumpd1Q99J36 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Thumpd1Q99J36 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Thumpd1Q99J36 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Thumpd1Q99J36 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thumpd1Q99J36 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thumpd1Q99J36 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thumpd1Q99J36 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Thumpd1Q99J36 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thumpd1Q99J36 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thumpd1Q99J36 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Thumpd1Q99J36 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thumpd1Q99J36 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.5■□□□□ 0.87
Thumpd1Q99J36 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Thumpd1Q99J36 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Thumpd1Q99J36 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.49■□□□□ 0.87
Thumpd1Q99J36 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Thumpd1Q99J36 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.48■□□□□ 0.87
Thumpd1Q99J36 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Thumpd1Q99J36 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Thumpd1Q99J36 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Thumpd1Q99J36 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Thumpd1Q99J36 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Thumpd1Q99J36 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms