Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.3■■□□□ 1.16
Pcdhb20Q91XZ9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb20Q91XZ9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb20Q91XZ9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb20Q91XZ9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb20Q91XZ9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb20Q91XZ9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 Mir3960-201ENSMUST00000198213 73 ntBASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.28■■□□□ 1.16
Pcdhb20Q91XZ9 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.27■■□□□ 1.16
Pcdhb20Q91XZ9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb20Q91XZ9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb20Q91XZ9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.27■■□□□ 1.16
Pcdhb20Q91XZ9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb20Q91XZ9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdhb20Q91XZ9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdhb20Q91XZ9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdhb20Q91XZ9 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.25■■□□□ 1.15
Pcdhb20Q91XZ9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb20Q91XZ9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb20Q91XZ9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb20Q91XZ9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb20Q91XZ9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb20Q91XZ9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.23■■□□□ 1.15
Pcdhb20Q91XZ9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.23■■□□□ 1.15
Pcdhb20Q91XZ9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb20Q91XZ9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb20Q91XZ9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pcdhb20Q91XZ9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb20Q91XZ9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb20Q91XZ9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb20Q91XZ9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pcdhb20Q91XZ9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Pcdhb20Q91XZ9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb20Q91XZ9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb20Q91XZ9 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.2■■□□□ 1.14
Pcdhb20Q91XZ9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb20Q91XZ9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb20Q91XZ9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb20Q91XZ9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Pcdhb20Q91XZ9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb20Q91XZ9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pcdhb20Q91XZ9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Pcdhb20Q91XZ9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pcdhb20Q91XZ9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb20Q91XZ9 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.17■■□□□ 1.14
Pcdhb20Q91XZ9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb20Q91XZ9 Gm45364-201ENSMUST00000210883 159 ntBASIC22.17■■□□□ 1.14
Pcdhb20Q91XZ9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Pcdhb20Q91XZ9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb20Q91XZ9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Pcdhb20Q91XZ9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb20Q91XZ9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Pcdhb20Q91XZ9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb20Q91XZ9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb20Q91XZ9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb20Q91XZ9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.15■■□□□ 1.14
Pcdhb20Q91XZ9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb20Q91XZ9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb20Q91XZ9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Pcdhb20Q91XZ9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb20Q91XZ9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb20Q91XZ9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Pcdhb20Q91XZ9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.14■■□□□ 1.13
Pcdhb20Q91XZ9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.13■■□□□ 1.13
Pcdhb20Q91XZ9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb20Q91XZ9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb20Q91XZ9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb20Q91XZ9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Pcdhb20Q91XZ9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
Pcdhb20Q91XZ9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pcdhb20Q91XZ9 Mir6538-201ENSMUST00000183713 110 ntBASIC22.12■■□□□ 1.13
Pcdhb20Q91XZ9 Gm9812-201ENSMUST00000061934 968 ntBASIC22.12■■□□□ 1.13
Pcdhb20Q91XZ9 Gm11175-201ENSMUST00000116172 543 ntBASIC22.11■■□□□ 1.13
Pcdhb20Q91XZ9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb20Q91XZ9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb20Q91XZ9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pcdhb20Q91XZ9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pcdhb20Q91XZ9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb20Q91XZ9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.09■■□□□ 1.13
Pcdhb20Q91XZ9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb20Q91XZ9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pcdhb20Q91XZ9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb20Q91XZ9 Scarna2-201ENSMUST00000157560 414 ntBASIC22.08■■□□□ 1.13
Pcdhb20Q91XZ9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb20Q91XZ9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Pcdhb20Q91XZ9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pcdhb20Q91XZ9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Pcdhb20Q91XZ9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb20Q91XZ9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb20Q91XZ9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb20Q91XZ9 Gm9806-201ENSMUST00000051080 552 ntBASIC22.07■■□□□ 1.12
Pcdhb20Q91XZ9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb20Q91XZ9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pcdhb20Q91XZ9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms