Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb4Q91XZ6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb4Q91XZ6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb4Q91XZ6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb4Q91XZ6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
Pcdhb4Q91XZ6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb4Q91XZ6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb4Q91XZ6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb4Q91XZ6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb4Q91XZ6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhb4Q91XZ6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhb4Q91XZ6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Pcdhb4Q91XZ6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb4Q91XZ6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb4Q91XZ6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb4Q91XZ6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.94■■□□□ 1.26
Pcdhb4Q91XZ6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb4Q91XZ6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb4Q91XZ6 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.93■■□□□ 1.26
Pcdhb4Q91XZ6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb4Q91XZ6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb4Q91XZ6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb4Q91XZ6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.92■■□□□ 1.26
Pcdhb4Q91XZ6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb4Q91XZ6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb4Q91XZ6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.91■■□□□ 1.26
Pcdhb4Q91XZ6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.9■■□□□ 1.26
Pcdhb4Q91XZ6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb4Q91XZ6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Pcdhb4Q91XZ6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb4Q91XZ6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhb4Q91XZ6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
Pcdhb4Q91XZ6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb4Q91XZ6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb4Q91XZ6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb4Q91XZ6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.89■■□□□ 1.25
Pcdhb4Q91XZ6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Pcdhb4Q91XZ6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb4Q91XZ6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb4Q91XZ6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb4Q91XZ6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb4Q91XZ6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
Pcdhb4Q91XZ6 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Pcdhb4Q91XZ6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb4Q91XZ6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb4Q91XZ6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb4Q91XZ6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb4Q91XZ6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb4Q91XZ6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Pcdhb4Q91XZ6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb4Q91XZ6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb4Q91XZ6 Nkain2-201ENSMUST00000092602 558 ntBASIC22.84■■□□□ 1.25
Pcdhb4Q91XZ6 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.84■■□□□ 1.25
Pcdhb4Q91XZ6 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.84■■□□□ 1.25
Pcdhb4Q91XZ6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Pcdhb4Q91XZ6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhb4Q91XZ6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.83■■□□□ 1.25
Pcdhb4Q91XZ6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.83■■□□□ 1.25
Pcdhb4Q91XZ6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdhb4Q91XZ6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pcdhb4Q91XZ6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb4Q91XZ6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhb4Q91XZ6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Pcdhb4Q91XZ6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhb4Q91XZ6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhb4Q91XZ6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhb4Q91XZ6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Pcdhb4Q91XZ6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb4Q91XZ6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Pcdhb4Q91XZ6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb4Q91XZ6 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb4Q91XZ6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb4Q91XZ6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhb4Q91XZ6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhb4Q91XZ6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.79■■□□□ 1.24
Pcdhb4Q91XZ6 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.79■■□□□ 1.24
Pcdhb4Q91XZ6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb4Q91XZ6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb4Q91XZ6 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
Pcdhb4Q91XZ6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhb4Q91XZ6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Pcdhb4Q91XZ6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhb4Q91XZ6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 Particl-201ENSMUST00000205370 1560 ntBASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhb4Q91XZ6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Pcdhb4Q91XZ6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms