Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb4Q91XX6 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.6■■□□□ 1.53
Pcdhgb4Q91XX6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhgb4Q91XX6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhgb4Q91XX6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhgb4Q91XX6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhgb4Q91XX6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Pcdhgb4Q91XX6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.58■■□□□ 1.53
Pcdhgb4Q91XX6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhgb4Q91XX6 Particl-201ENSMUST00000205370 1560 ntBASIC24.58■■□□□ 1.52
Pcdhgb4Q91XX6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Pcdhgb4Q91XX6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhgb4Q91XX6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Pcdhgb4Q91XX6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
Pcdhgb4Q91XX6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhgb4Q91XX6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Pcdhgb4Q91XX6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb4Q91XX6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Pcdhgb4Q91XX6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb4Q91XX6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb4Q91XX6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhgb4Q91XX6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Pcdhgb4Q91XX6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgb4Q91XX6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgb4Q91XX6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24.53■■□□□ 1.52
Pcdhgb4Q91XX6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgb4Q91XX6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhgb4Q91XX6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Pcdhgb4Q91XX6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhgb4Q91XX6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhgb4Q91XX6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.51■■□□□ 1.51
Pcdhgb4Q91XX6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhgb4Q91XX6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Pcdhgb4Q91XX6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.5■■□□□ 1.51
Pcdhgb4Q91XX6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhgb4Q91XX6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.5■■□□□ 1.51
Pcdhgb4Q91XX6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.5■■□□□ 1.51
Pcdhgb4Q91XX6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhgb4Q91XX6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhgb4Q91XX6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhgb4Q91XX6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhgb4Q91XX6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhgb4Q91XX6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhgb4Q91XX6 Gm6821-201ENSMUST00000107540 542 ntBASIC24.48■■□□□ 1.51
Pcdhgb4Q91XX6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.48■■□□□ 1.51
Pcdhgb4Q91XX6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhgb4Q91XX6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhgb4Q91XX6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
Pcdhgb4Q91XX6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhgb4Q91XX6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhgb4Q91XX6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Pcdhgb4Q91XX6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Pcdhgb4Q91XX6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhgb4Q91XX6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.46■■□□□ 1.51
Pcdhgb4Q91XX6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Pcdhgb4Q91XX6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
Pcdhgb4Q91XX6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhgb4Q91XX6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhgb4Q91XX6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhgb4Q91XX6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhgb4Q91XX6 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.43■■□□□ 1.5
Pcdhgb4Q91XX6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhgb4Q91XX6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhgb4Q91XX6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhgb4Q91XX6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pcdhgb4Q91XX6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhgb4Q91XX6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhgb4Q91XX6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhgb4Q91XX6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhgb4Q91XX6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
Pcdhgb4Q91XX6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.41■■□□□ 1.5
Pcdhgb4Q91XX6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Pcdhgb4Q91XX6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhgb4Q91XX6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhgb4Q91XX6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Pcdhgb4Q91XX6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhgb4Q91XX6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhgb4Q91XX6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhgb4Q91XX6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhgb4Q91XX6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgb4Q91XX6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgb4Q91XX6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhgb4Q91XX6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhgb4Q91XX6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhgb4Q91XX6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhgb4Q91XX6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhgb4Q91XX6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.36■■□□□ 1.49
Pcdhgb4Q91XX6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhgb4Q91XX6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.35■■□□□ 1.49
Pcdhgb4Q91XX6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb4Q91XX6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhgb4Q91XX6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhgb4Q91XX6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhgb4Q91XX6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhgb4Q91XX6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhgb4Q91XX6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhgb4Q91XX6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhgb4Q91XX6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhgb4Q91XX6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhgb4Q91XX6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms