Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhgc5Q91XW9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhgc5Q91XW9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhgc5Q91XW9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhgc5Q91XW9 Gm4799-201ENSMUST00000095396 657 ntBASIC26.58■■□□□ 1.85
Pcdhgc5Q91XW9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Gm12366-201ENSMUST00000121722 873 ntBASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Gm5786-201ENSMUST00000085368 882 ntBASIC26.57■■□□□ 1.84
Pcdhgc5Q91XW9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhgc5Q91XW9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC26.56■■□□□ 1.84
Pcdhgc5Q91XW9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC26.56■■□□□ 1.84
Pcdhgc5Q91XW9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhgc5Q91XW9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhgc5Q91XW9 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.56■■□□□ 1.84
Pcdhgc5Q91XW9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhgc5Q91XW9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Pcdhgc5Q91XW9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.55■■□□□ 1.84
Pcdhgc5Q91XW9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhgc5Q91XW9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Pcdhgc5Q91XW9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.54■■□□□ 1.84
Pcdhgc5Q91XW9 Gm11687-201ENSMUST00000118911 886 ntBASIC26.54■■□□□ 1.84
Pcdhgc5Q91XW9 Gm16437-201ENSMUST00000025669 507 ntBASIC26.54■■□□□ 1.84
Pcdhgc5Q91XW9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhgc5Q91XW9 Gm9806-201ENSMUST00000051080 552 ntBASIC26.54■■□□□ 1.84
Pcdhgc5Q91XW9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.54■■□□□ 1.84
Pcdhgc5Q91XW9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhgc5Q91XW9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhgc5Q91XW9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhgc5Q91XW9 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC26.52■■□□□ 1.84
Pcdhgc5Q91XW9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhgc5Q91XW9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
Pcdhgc5Q91XW9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
Pcdhgc5Q91XW9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhgc5Q91XW9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhgc5Q91XW9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
Pcdhgc5Q91XW9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhgc5Q91XW9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhgc5Q91XW9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhgc5Q91XW9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhgc5Q91XW9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhgc5Q91XW9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhgc5Q91XW9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Pcdhgc5Q91XW9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhgc5Q91XW9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhgc5Q91XW9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhgc5Q91XW9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhgc5Q91XW9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhgc5Q91XW9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhgc5Q91XW9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Pcdhgc5Q91XW9 Gm27502-201ENSMUST00000183495 199 ntBASIC26.44■■□□□ 1.82
Pcdhgc5Q91XW9 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.43■■□□□ 1.82
Pcdhgc5Q91XW9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Pcdhgc5Q91XW9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
Pcdhgc5Q91XW9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Pcdhgc5Q91XW9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Pcdhgc5Q91XW9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhgc5Q91XW9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Pcdhgc5Q91XW9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.4■■□□□ 1.82
Pcdhgc5Q91XW9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdhgc5Q91XW9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pcdhgc5Q91XW9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhgc5Q91XW9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhgc5Q91XW9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhgc5Q91XW9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhgc5Q91XW9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.36■■□□□ 1.81
Pcdhgc5Q91XW9 Gm45364-201ENSMUST00000210883 159 ntBASIC26.35■■□□□ 1.81
Pcdhgc5Q91XW9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
Pcdhgc5Q91XW9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhgc5Q91XW9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Pcdhgc5Q91XW9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Pcdhgc5Q91XW9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
Pcdhgc5Q91XW9 Mir3960-201ENSMUST00000198213 73 ntBASIC26.32■■□□□ 1.8
Pcdhgc5Q91XW9 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.32■■□□□ 1.8
Pcdhgc5Q91XW9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhgc5Q91XW9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhgc5Q91XW9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.31■■□□□ 1.8
Pcdhgc5Q91XW9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.31■■□□□ 1.8
Pcdhgc5Q91XW9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhgc5Q91XW9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Pcdhgc5Q91XW9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhgc5Q91XW9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhgc5Q91XW9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.3■■□□□ 1.8
Pcdhgc5Q91XW9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhgc5Q91XW9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhgc5Q91XW9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhgc5Q91XW9 Gm7332-201ENSMUST00000118351 454 ntBASIC26.28■■□□□ 1.8
Pcdhgc5Q91XW9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Pcdhgc5Q91XW9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms