Protein–RNA interactions for Protein: Q8VCM8

Ncln, Nicalin, mousemouse

Known RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclnQ8VCM8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
NclnQ8VCM8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NclnQ8VCM8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
NclnQ8VCM8 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NclnQ8VCM8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NclnQ8VCM8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
NclnQ8VCM8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NclnQ8VCM8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NclnQ8VCM8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NclnQ8VCM8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NclnQ8VCM8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NclnQ8VCM8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NclnQ8VCM8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NclnQ8VCM8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NclnQ8VCM8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NclnQ8VCM8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NclnQ8VCM8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.38■■□□□ 1.17
NclnQ8VCM8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NclnQ8VCM8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NclnQ8VCM8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.37■■□□□ 1.17
NclnQ8VCM8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
NclnQ8VCM8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NclnQ8VCM8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NclnQ8VCM8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
NclnQ8VCM8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NclnQ8VCM8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NclnQ8VCM8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.34■■□□□ 1.17
NclnQ8VCM8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.34■■□□□ 1.17
NclnQ8VCM8 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
NclnQ8VCM8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
NclnQ8VCM8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
NclnQ8VCM8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NclnQ8VCM8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.32■■□□□ 1.16
NclnQ8VCM8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclnQ8VCM8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclnQ8VCM8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NclnQ8VCM8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclnQ8VCM8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NclnQ8VCM8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
NclnQ8VCM8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NclnQ8VCM8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.3■■□□□ 1.16
NclnQ8VCM8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NclnQ8VCM8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.29■■□□□ 1.16
NclnQ8VCM8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
NclnQ8VCM8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
NclnQ8VCM8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NclnQ8VCM8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NclnQ8VCM8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NclnQ8VCM8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NclnQ8VCM8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.26■■□□□ 1.15
NclnQ8VCM8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NclnQ8VCM8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NclnQ8VCM8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NclnQ8VCM8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NclnQ8VCM8 Gm37136-201ENSMUST00000194368 194 ntBASIC22.25■■□□□ 1.15
NclnQ8VCM8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.25■■□□□ 1.15
NclnQ8VCM8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NclnQ8VCM8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclnQ8VCM8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.24■■□□□ 1.15
NclnQ8VCM8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.24■■□□□ 1.15
NclnQ8VCM8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NclnQ8VCM8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
NclnQ8VCM8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
NclnQ8VCM8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NclnQ8VCM8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
NclnQ8VCM8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
NclnQ8VCM8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NclnQ8VCM8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclnQ8VCM8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclnQ8VCM8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclnQ8VCM8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NclnQ8VCM8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
NclnQ8VCM8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NclnQ8VCM8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NclnQ8VCM8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
NclnQ8VCM8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
NclnQ8VCM8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.19■■□□□ 1.14
NclnQ8VCM8 Gm6311-201ENSMUST00000073790 878 ntBASIC22.19■■□□□ 1.14
NclnQ8VCM8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NclnQ8VCM8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.19■■□□□ 1.14
NclnQ8VCM8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NclnQ8VCM8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NclnQ8VCM8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NclnQ8VCM8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NclnQ8VCM8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NclnQ8VCM8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NclnQ8VCM8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NclnQ8VCM8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
NclnQ8VCM8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NclnQ8VCM8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.16■■□□□ 1.14
NclnQ8VCM8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NclnQ8VCM8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
NclnQ8VCM8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms