Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Upb1Q8VC97 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Upb1Q8VC97 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Upb1Q8VC97 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Upb1Q8VC97 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.43■■□□□ 1.66
Upb1Q8VC97 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Upb1Q8VC97 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Upb1Q8VC97 Gm11175-201ENSMUST00000116172 543 ntBASIC25.42■■□□□ 1.66
Upb1Q8VC97 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.42■■□□□ 1.66
Upb1Q8VC97 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.42■■□□□ 1.66
Upb1Q8VC97 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Upb1Q8VC97 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Upb1Q8VC97 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.41■■□□□ 1.66
Upb1Q8VC97 Gm45364-201ENSMUST00000210883 159 ntBASIC25.41■■□□□ 1.66
Upb1Q8VC97 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Upb1Q8VC97 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Upb1Q8VC97 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Upb1Q8VC97 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Upb1Q8VC97 Mir6538-201ENSMUST00000183713 110 ntBASIC25.39■■□□□ 1.66
Upb1Q8VC97 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Upb1Q8VC97 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Upb1Q8VC97 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
Upb1Q8VC97 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Upb1Q8VC97 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.38■■□□□ 1.65
Upb1Q8VC97 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Upb1Q8VC97 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Upb1Q8VC97 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Upb1Q8VC97 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Upb1Q8VC97 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Upb1Q8VC97 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Upb1Q8VC97 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.37■■□□□ 1.65
Upb1Q8VC97 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Upb1Q8VC97 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Upb1Q8VC97 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
Upb1Q8VC97 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Upb1Q8VC97 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Upb1Q8VC97 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Upb1Q8VC97 Gm12818-201ENSMUST00000117562 1349 ntBASIC25.36■■□□□ 1.65
Upb1Q8VC97 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Upb1Q8VC97 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Upb1Q8VC97 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Upb1Q8VC97 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Upb1Q8VC97 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Upb1Q8VC97 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Upb1Q8VC97 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Upb1Q8VC97 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Upb1Q8VC97 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Upb1Q8VC97 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Upb1Q8VC97 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Upb1Q8VC97 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Upb1Q8VC97 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Upb1Q8VC97 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.3■■□□□ 1.64
Upb1Q8VC97 Scarna2-201ENSMUST00000157560 414 ntBASIC25.3■■□□□ 1.64
Upb1Q8VC97 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Upb1Q8VC97 Gm9812-201ENSMUST00000061934 968 ntBASIC25.29■■□□□ 1.64
Upb1Q8VC97 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Upb1Q8VC97 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Upb1Q8VC97 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Upb1Q8VC97 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Upb1Q8VC97 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Upb1Q8VC97 Gm9806-201ENSMUST00000051080 552 ntBASIC25.28■■□□□ 1.64
Upb1Q8VC97 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Upb1Q8VC97 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Upb1Q8VC97 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Upb1Q8VC97 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Upb1Q8VC97 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Upb1Q8VC97 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Upb1Q8VC97 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
Upb1Q8VC97 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Upb1Q8VC97 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Upb1Q8VC97 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Upb1Q8VC97 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
Upb1Q8VC97 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
Upb1Q8VC97 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Upb1Q8VC97 Gm11687-201ENSMUST00000118911 886 ntBASIC25.24■■□□□ 1.63
Upb1Q8VC97 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.24■■□□□ 1.63
Upb1Q8VC97 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Upb1Q8VC97 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Upb1Q8VC97 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC25.23■■□□□ 1.63
Upb1Q8VC97 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Upb1Q8VC97 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Upb1Q8VC97 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.23■■□□□ 1.63
Upb1Q8VC97 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.22■■□□□ 1.63
Upb1Q8VC97 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.22■■□□□ 1.63
Upb1Q8VC97 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Upb1Q8VC97 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.21■■□□□ 1.63
Upb1Q8VC97 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Upb1Q8VC97 Gm16437-201ENSMUST00000025669 507 ntBASIC25.2■■□□□ 1.62
Upb1Q8VC97 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Upb1Q8VC97 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Upb1Q8VC97 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Upb1Q8VC97 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Upb1Q8VC97 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Upb1Q8VC97 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Upb1Q8VC97 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.18■■□□□ 1.62
Upb1Q8VC97 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Upb1Q8VC97 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Upb1Q8VC97 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Upb1Q8VC97 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Upb1Q8VC97 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms