Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Gm30023-201ENSMUST00000197970 889 ntBASIC20.88■□□□□ 0.93
Cuedc1Q8R3V6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Cuedc1Q8R3V6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cuedc1Q8R3V6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cuedc1Q8R3V6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cuedc1Q8R3V6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cuedc1Q8R3V6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cuedc1Q8R3V6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.87■□□□□ 0.93
Cuedc1Q8R3V6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cuedc1Q8R3V6 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.85■□□□□ 0.93
Cuedc1Q8R3V6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Cuedc1Q8R3V6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.85■□□□□ 0.93
Cuedc1Q8R3V6 Gm4799-201ENSMUST00000095396 657 ntBASIC20.85■□□□□ 0.93
Cuedc1Q8R3V6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cuedc1Q8R3V6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cuedc1Q8R3V6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cuedc1Q8R3V6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cuedc1Q8R3V6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cuedc1Q8R3V6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.84■□□□□ 0.93
Cuedc1Q8R3V6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cuedc1Q8R3V6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cuedc1Q8R3V6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cuedc1Q8R3V6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cuedc1Q8R3V6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.83■□□□□ 0.93
Cuedc1Q8R3V6 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.83■□□□□ 0.93
Cuedc1Q8R3V6 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.83■□□□□ 0.93
Cuedc1Q8R3V6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cuedc1Q8R3V6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.82■□□□□ 0.92
Cuedc1Q8R3V6 Gm16437-201ENSMUST00000025669 507 ntBASIC20.82■□□□□ 0.92
Cuedc1Q8R3V6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cuedc1Q8R3V6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cuedc1Q8R3V6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cuedc1Q8R3V6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cuedc1Q8R3V6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cuedc1Q8R3V6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cuedc1Q8R3V6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cuedc1Q8R3V6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cuedc1Q8R3V6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Gm7332-201ENSMUST00000118351 454 ntBASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cuedc1Q8R3V6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cuedc1Q8R3V6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cuedc1Q8R3V6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.77■□□□□ 0.92
Cuedc1Q8R3V6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cuedc1Q8R3V6 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.76■□□□□ 0.91
Cuedc1Q8R3V6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cuedc1Q8R3V6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cuedc1Q8R3V6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cuedc1Q8R3V6 Gm15039-201ENSMUST00000118914 875 ntBASIC20.75■□□□□ 0.91
Cuedc1Q8R3V6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cuedc1Q8R3V6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cuedc1Q8R3V6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cuedc1Q8R3V6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cuedc1Q8R3V6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cuedc1Q8R3V6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cuedc1Q8R3V6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.74■□□□□ 0.91
Cuedc1Q8R3V6 Mir3960-201ENSMUST00000198213 73 ntBASIC20.74■□□□□ 0.91
Cuedc1Q8R3V6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.74■□□□□ 0.91
Cuedc1Q8R3V6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cuedc1Q8R3V6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cuedc1Q8R3V6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
Cuedc1Q8R3V6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cuedc1Q8R3V6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cuedc1Q8R3V6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cuedc1Q8R3V6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cuedc1Q8R3V6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cuedc1Q8R3V6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.71■□□□□ 0.91
Cuedc1Q8R3V6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cuedc1Q8R3V6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.7■□□□□ 0.9
Cuedc1Q8R3V6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cuedc1Q8R3V6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cuedc1Q8R3V6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cuedc1Q8R3V6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.69■□□□□ 0.9
Cuedc1Q8R3V6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cuedc1Q8R3V6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cuedc1Q8R3V6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cuedc1Q8R3V6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cuedc1Q8R3V6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cuedc1Q8R3V6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cuedc1Q8R3V6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cuedc1Q8R3V6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cuedc1Q8R3V6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cuedc1Q8R3V6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Cuedc1Q8R3V6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cuedc1Q8R3V6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms