Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Gtf3c5Q8R2T8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Gtf3c5Q8R2T8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.09■■□□□ 1.93
Gtf3c5Q8R2T8 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Gtf3c5Q8R2T8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Gtf3c5Q8R2T8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Gtf3c5Q8R2T8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Gtf3c5Q8R2T8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Gtf3c5Q8R2T8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
Gtf3c5Q8R2T8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Gtf3c5Q8R2T8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.03■■□□□ 1.92
Gtf3c5Q8R2T8 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.03■■□□□ 1.92
Gtf3c5Q8R2T8 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.03■■□□□ 1.92
Gtf3c5Q8R2T8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Gtf3c5Q8R2T8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Gtf3c5Q8R2T8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Gtf3c5Q8R2T8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Gtf3c5Q8R2T8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gtf3c5Q8R2T8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.02■■□□□ 1.92
Gtf3c5Q8R2T8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Gtf3c5Q8R2T8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Gtf3c5Q8R2T8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.01■■□□□ 1.91
Gtf3c5Q8R2T8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
Gtf3c5Q8R2T8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Gtf3c5Q8R2T8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.99■■□□□ 1.91
Gtf3c5Q8R2T8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Gtf3c5Q8R2T8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Gtf3c5Q8R2T8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
Gtf3c5Q8R2T8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Gtf3c5Q8R2T8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.97■■□□□ 1.91
Gtf3c5Q8R2T8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Gtf3c5Q8R2T8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Gtf3c5Q8R2T8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Gtf3c5Q8R2T8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Gtf3c5Q8R2T8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Gtf3c5Q8R2T8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Gtf3c5Q8R2T8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Gtf3c5Q8R2T8 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.92■■□□□ 1.9
Gtf3c5Q8R2T8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Gtf3c5Q8R2T8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Gtf3c5Q8R2T8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.91■■□□□ 1.9
Gtf3c5Q8R2T8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.91■■□□□ 1.9
Gtf3c5Q8R2T8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Gtf3c5Q8R2T8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Gtf3c5Q8R2T8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Gtf3c5Q8R2T8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Gtf3c5Q8R2T8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.89■■□□□ 1.9
Gtf3c5Q8R2T8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Gtf3c5Q8R2T8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
Gtf3c5Q8R2T8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Gtf3c5Q8R2T8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.87■■□□□ 1.89
Gtf3c5Q8R2T8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Gtf3c5Q8R2T8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Gtf3c5Q8R2T8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Gtf3c5Q8R2T8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Gtf3c5Q8R2T8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Gtf3c5Q8R2T8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Gtf3c5Q8R2T8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Gtf3c5Q8R2T8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.84■■□□□ 1.89
Gtf3c5Q8R2T8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Gtf3c5Q8R2T8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Gtf3c5Q8R2T8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.84■■□□□ 1.89
Gtf3c5Q8R2T8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
Gtf3c5Q8R2T8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Gtf3c5Q8R2T8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Gtf3c5Q8R2T8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Gtf3c5Q8R2T8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC26.82■■□□□ 1.88
Gtf3c5Q8R2T8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.82■■□□□ 1.88
Gtf3c5Q8R2T8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Gtf3c5Q8R2T8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Gtf3c5Q8R2T8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Gtf3c5Q8R2T8 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.81■■□□□ 1.88
Gtf3c5Q8R2T8 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.81■■□□□ 1.88
Gtf3c5Q8R2T8 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.81■■□□□ 1.88
Gtf3c5Q8R2T8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Gtf3c5Q8R2T8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Gtf3c5Q8R2T8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.8■■□□□ 1.88
Gtf3c5Q8R2T8 Gm4799-201ENSMUST00000095396 657 ntBASIC26.8■■□□□ 1.88
Gtf3c5Q8R2T8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.79■■□□□ 1.88
Gtf3c5Q8R2T8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.79■■□□□ 1.88
Gtf3c5Q8R2T8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Gtf3c5Q8R2T8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
Gtf3c5Q8R2T8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Gtf3c5Q8R2T8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Gtf3c5Q8R2T8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Gtf3c5Q8R2T8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Gtf3c5Q8R2T8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.77■■□□□ 1.88
Gtf3c5Q8R2T8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Gtf3c5Q8R2T8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Gtf3c5Q8R2T8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Gtf3c5Q8R2T8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Gtf3c5Q8R2T8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Gtf3c5Q8R2T8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms