Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
H2afjQ8R1M2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.42■■□□□ 1.02
H2afjQ8R1M2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.42■■□□□ 1.02
H2afjQ8R1M2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
H2afjQ8R1M2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
H2afjQ8R1M2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.41■■□□□ 1.02
H2afjQ8R1M2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afjQ8R1M2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afjQ8R1M2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afjQ8R1M2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
H2afjQ8R1M2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afjQ8R1M2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afjQ8R1M2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
H2afjQ8R1M2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
H2afjQ8R1M2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
H2afjQ8R1M2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
H2afjQ8R1M2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
H2afjQ8R1M2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
H2afjQ8R1M2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afjQ8R1M2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afjQ8R1M2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
H2afjQ8R1M2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
H2afjQ8R1M2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
H2afjQ8R1M2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.38■■□□□ 1.01
H2afjQ8R1M2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
H2afjQ8R1M2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
H2afjQ8R1M2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.36■■□□□ 1.01
H2afjQ8R1M2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
H2afjQ8R1M2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
H2afjQ8R1M2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.36■■□□□ 1.01
H2afjQ8R1M2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
H2afjQ8R1M2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
H2afjQ8R1M2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
H2afjQ8R1M2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
H2afjQ8R1M2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H2afjQ8R1M2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.32■■□□□ 1
H2afjQ8R1M2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.32■■□□□ 1
H2afjQ8R1M2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.32■■□□□ 1
H2afjQ8R1M2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H2afjQ8R1M2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.32■■□□□ 1
H2afjQ8R1M2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
H2afjQ8R1M2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2afjQ8R1M2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2afjQ8R1M2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2afjQ8R1M2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2afjQ8R1M2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
H2afjQ8R1M2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2afjQ8R1M2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2afjQ8R1M2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2afjQ8R1M2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.3■■□□□ 1
H2afjQ8R1M2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2afjQ8R1M2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
H2afjQ8R1M2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afjQ8R1M2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afjQ8R1M2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.29■■□□□ 1
H2afjQ8R1M2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.29■■□□□ 1
H2afjQ8R1M2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afjQ8R1M2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afjQ8R1M2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
H2afjQ8R1M2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
H2afjQ8R1M2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2afjQ8R1M2 Gm30023-201ENSMUST00000197970 889 ntBASIC21.28■■□□□ 1
H2afjQ8R1M2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2afjQ8R1M2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2afjQ8R1M2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.28■■□□□ 1
H2afjQ8R1M2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
H2afjQ8R1M2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
H2afjQ8R1M2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
H2afjQ8R1M2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afjQ8R1M2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afjQ8R1M2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
H2afjQ8R1M2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
H2afjQ8R1M2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afjQ8R1M2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
H2afjQ8R1M2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2afjQ8R1M2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2afjQ8R1M2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2afjQ8R1M2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
H2afjQ8R1M2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
H2afjQ8R1M2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H2afjQ8R1M2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afjQ8R1M2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afjQ8R1M2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afjQ8R1M2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afjQ8R1M2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms