Protein–RNA interactions for Protein: Q8R0S4

Cacnb4, Voltage-dependent L-type calcium channel subunit beta-4, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb4Q8R0S4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacnb4Q8R0S4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cacnb4Q8R0S4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacnb4Q8R0S4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacnb4Q8R0S4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cacnb4Q8R0S4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Cacnb4Q8R0S4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb4Q8R0S4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacnb4Q8R0S4 Gm24970-201ENSMUST00000175582 82 ntBASIC20.75■□□□□ 0.91
Cacnb4Q8R0S4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Cacnb4Q8R0S4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb4Q8R0S4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cacnb4Q8R0S4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cacnb4Q8R0S4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb4Q8R0S4 Particl-201ENSMUST00000205370 1560 ntBASIC20.73■□□□□ 0.91
Cacnb4Q8R0S4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb4Q8R0S4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.73■□□□□ 0.91
Cacnb4Q8R0S4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacnb4Q8R0S4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.72■□□□□ 0.91
Cacnb4Q8R0S4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb4Q8R0S4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacnb4Q8R0S4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb4Q8R0S4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb4Q8R0S4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacnb4Q8R0S4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb4Q8R0S4 Gm45855-201ENSMUST00000212546 880 ntBASIC20.7■□□□□ 0.9
Cacnb4Q8R0S4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cacnb4Q8R0S4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.69■□□□□ 0.9
Cacnb4Q8R0S4 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.69■□□□□ 0.9
Cacnb4Q8R0S4 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.69■□□□□ 0.9
Cacnb4Q8R0S4 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.69■□□□□ 0.9
Cacnb4Q8R0S4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb4Q8R0S4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb4Q8R0S4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb4Q8R0S4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb4Q8R0S4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cacnb4Q8R0S4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb4Q8R0S4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cacnb4Q8R0S4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb4Q8R0S4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb4Q8R0S4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb4Q8R0S4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacnb4Q8R0S4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb4Q8R0S4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cacnb4Q8R0S4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.66■□□□□ 0.9
Cacnb4Q8R0S4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb4Q8R0S4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb4Q8R0S4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb4Q8R0S4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacnb4Q8R0S4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.64■□□□□ 0.9
Cacnb4Q8R0S4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cacnb4Q8R0S4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb4Q8R0S4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb4Q8R0S4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb4Q8R0S4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacnb4Q8R0S4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cacnb4Q8R0S4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cacnb4Q8R0S4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Cacnb4Q8R0S4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb4Q8R0S4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Cacnb4Q8R0S4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cacnb4Q8R0S4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cacnb4Q8R0S4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacnb4Q8R0S4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Cacnb4Q8R0S4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb4Q8R0S4 Gm30023-201ENSMUST00000197970 889 ntBASIC20.6■□□□□ 0.89
Cacnb4Q8R0S4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacnb4Q8R0S4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb4Q8R0S4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cacnb4Q8R0S4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb4Q8R0S4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cacnb4Q8R0S4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacnb4Q8R0S4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Cacnb4Q8R0S4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cacnb4Q8R0S4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacnb4Q8R0S4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb4Q8R0S4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cacnb4Q8R0S4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacnb4Q8R0S4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Cacnb4Q8R0S4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cacnb4Q8R0S4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb4Q8R0S4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb4Q8R0S4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb4Q8R0S4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacnb4Q8R0S4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb4Q8R0S4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb4Q8R0S4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cacnb4Q8R0S4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb4Q8R0S4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cacnb4Q8R0S4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.53■□□□□ 0.88
Cacnb4Q8R0S4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb4Q8R0S4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cacnb4Q8R0S4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cacnb4Q8R0S4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cacnb4Q8R0S4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cacnb4Q8R0S4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Cacnb4Q8R0S4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Cacnb4Q8R0S4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb4Q8R0S4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cacnb4Q8R0S4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms