Protein–RNA interactions for Protein: Q8K4Q6

Neil1, Endonuclease 8-like 1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Neil1Q8K4Q6 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Neil1Q8K4Q6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.15■□□□□ 0.82
Neil1Q8K4Q6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Neil1Q8K4Q6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Neil1Q8K4Q6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Neil1Q8K4Q6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.13■□□□□ 0.81
Neil1Q8K4Q6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Neil1Q8K4Q6 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.13■□□□□ 0.81
Neil1Q8K4Q6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
Neil1Q8K4Q6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.12■□□□□ 0.81
Neil1Q8K4Q6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Neil1Q8K4Q6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Neil1Q8K4Q6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Neil1Q8K4Q6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Neil1Q8K4Q6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Neil1Q8K4Q6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Neil1Q8K4Q6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Neil1Q8K4Q6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Neil1Q8K4Q6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Neil1Q8K4Q6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Neil1Q8K4Q6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Neil1Q8K4Q6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Neil1Q8K4Q6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Neil1Q8K4Q6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Neil1Q8K4Q6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Neil1Q8K4Q6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.08■□□□□ 0.81
Neil1Q8K4Q6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Neil1Q8K4Q6 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Neil1Q8K4Q6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Neil1Q8K4Q6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Neil1Q8K4Q6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Neil1Q8K4Q6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Neil1Q8K4Q6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Neil1Q8K4Q6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Neil1Q8K4Q6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Neil1Q8K4Q6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Neil1Q8K4Q6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Neil1Q8K4Q6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.04■□□□□ 0.8
Neil1Q8K4Q6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Neil1Q8K4Q6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Neil1Q8K4Q6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Neil1Q8K4Q6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.04■□□□□ 0.8
Neil1Q8K4Q6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Neil1Q8K4Q6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Neil1Q8K4Q6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Neil1Q8K4Q6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Neil1Q8K4Q6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Neil1Q8K4Q6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Neil1Q8K4Q6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Neil1Q8K4Q6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Neil1Q8K4Q6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Neil1Q8K4Q6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20■□□□□ 0.79
Neil1Q8K4Q6 AC157572.2-201ENSMUST00000226970 908 ntBASIC20■□□□□ 0.79
Neil1Q8K4Q6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Neil1Q8K4Q6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Neil1Q8K4Q6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Neil1Q8K4Q6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Neil1Q8K4Q6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Neil1Q8K4Q6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Neil1Q8K4Q6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Neil1Q8K4Q6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.99■□□□□ 0.79
Neil1Q8K4Q6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.98■□□□□ 0.79
Neil1Q8K4Q6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Neil1Q8K4Q6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Neil1Q8K4Q6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Neil1Q8K4Q6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Neil1Q8K4Q6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Neil1Q8K4Q6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Neil1Q8K4Q6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Neil1Q8K4Q6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Neil1Q8K4Q6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.96■□□□□ 0.79
Neil1Q8K4Q6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Neil1Q8K4Q6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.95■□□□□ 0.78
Neil1Q8K4Q6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Neil1Q8K4Q6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Neil1Q8K4Q6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Neil1Q8K4Q6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Neil1Q8K4Q6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Neil1Q8K4Q6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Neil1Q8K4Q6 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.93■□□□□ 0.78
Neil1Q8K4Q6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Neil1Q8K4Q6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Neil1Q8K4Q6 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Neil1Q8K4Q6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.92■□□□□ 0.78
Neil1Q8K4Q6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.92■□□□□ 0.78
Neil1Q8K4Q6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Neil1Q8K4Q6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Neil1Q8K4Q6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Neil1Q8K4Q6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Neil1Q8K4Q6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Neil1Q8K4Q6 Particl-201ENSMUST00000205370 1560 ntBASIC19.91■□□□□ 0.78
Neil1Q8K4Q6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Neil1Q8K4Q6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.9■□□□□ 0.78
Neil1Q8K4Q6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Neil1Q8K4Q6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Neil1Q8K4Q6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.9■□□□□ 0.78
Neil1Q8K4Q6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Neil1Q8K4Q6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Neil1Q8K4Q6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Neil1Q8K4Q6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms