Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Clrn1Q8K445 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.89■■□□□ 1.09
Clrn1Q8K445 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Clrn1Q8K445 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Clrn1Q8K445 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Clrn1Q8K445 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Clrn1Q8K445 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Clrn1Q8K445 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Clrn1Q8K445 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Clrn1Q8K445 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Clrn1Q8K445 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Clrn1Q8K445 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Clrn1Q8K445 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Clrn1Q8K445 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clrn1Q8K445 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Clrn1Q8K445 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Clrn1Q8K445 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Clrn1Q8K445 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Clrn1Q8K445 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Clrn1Q8K445 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Clrn1Q8K445 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Clrn1Q8K445 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Clrn1Q8K445 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Clrn1Q8K445 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Clrn1Q8K445 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Clrn1Q8K445 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Clrn1Q8K445 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Clrn1Q8K445 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.81■■□□□ 1.08
Clrn1Q8K445 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.81■■□□□ 1.08
Clrn1Q8K445 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.8■■□□□ 1.08
Clrn1Q8K445 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
Clrn1Q8K445 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.8■■□□□ 1.08
Clrn1Q8K445 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Clrn1Q8K445 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.79■■□□□ 1.08
Clrn1Q8K445 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Clrn1Q8K445 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Clrn1Q8K445 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clrn1Q8K445 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clrn1Q8K445 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Clrn1Q8K445 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Clrn1Q8K445 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clrn1Q8K445 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Clrn1Q8K445 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Clrn1Q8K445 Gm7432-201ENSMUST00000210343 879 ntBASIC21.76■■□□□ 1.07
Clrn1Q8K445 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clrn1Q8K445 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clrn1Q8K445 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Clrn1Q8K445 Gm37136-201ENSMUST00000194368 194 ntBASIC21.75■■□□□ 1.07
Clrn1Q8K445 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clrn1Q8K445 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Clrn1Q8K445 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Clrn1Q8K445 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clrn1Q8K445 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Clrn1Q8K445 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clrn1Q8K445 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clrn1Q8K445 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Clrn1Q8K445 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Clrn1Q8K445 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Clrn1Q8K445 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Clrn1Q8K445 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.71■■□□□ 1.07
Clrn1Q8K445 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clrn1Q8K445 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Clrn1Q8K445 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Clrn1Q8K445 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clrn1Q8K445 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.69■■□□□ 1.06
Clrn1Q8K445 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clrn1Q8K445 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Clrn1Q8K445 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clrn1Q8K445 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Clrn1Q8K445 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Clrn1Q8K445 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.67■■□□□ 1.06
Clrn1Q8K445 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn1Q8K445 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn1Q8K445 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn1Q8K445 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn1Q8K445 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Clrn1Q8K445 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn1Q8K445 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn1Q8K445 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn1Q8K445 Gm11599-201ENSMUST00000118720 878 ntBASIC21.66■■□□□ 1.06
Clrn1Q8K445 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Clrn1Q8K445 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn1Q8K445 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Clrn1Q8K445 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.65■■□□□ 1.06
Clrn1Q8K445 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Clrn1Q8K445 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
Clrn1Q8K445 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Clrn1Q8K445 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clrn1Q8K445 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Clrn1Q8K445 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Clrn1Q8K445 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.64■■□□□ 1.05
Clrn1Q8K445 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Clrn1Q8K445 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Clrn1Q8K445 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clrn1Q8K445 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clrn1Q8K445 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clrn1Q8K445 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Clrn1Q8K445 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Clrn1Q8K445 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Clrn1Q8K445 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms