Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CroccQ8CJ40 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CroccQ8CJ40 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.41■■□□□ 1.18
CroccQ8CJ40 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CroccQ8CJ40 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CroccQ8CJ40 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CroccQ8CJ40 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.4■■□□□ 1.18
CroccQ8CJ40 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
CroccQ8CJ40 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CroccQ8CJ40 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
CroccQ8CJ40 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CroccQ8CJ40 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CroccQ8CJ40 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CroccQ8CJ40 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CroccQ8CJ40 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CroccQ8CJ40 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CroccQ8CJ40 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CroccQ8CJ40 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CroccQ8CJ40 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CroccQ8CJ40 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CroccQ8CJ40 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CroccQ8CJ40 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CroccQ8CJ40 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CroccQ8CJ40 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CroccQ8CJ40 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.33■■□□□ 1.17
CroccQ8CJ40 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CroccQ8CJ40 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
CroccQ8CJ40 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CroccQ8CJ40 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CroccQ8CJ40 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CroccQ8CJ40 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CroccQ8CJ40 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CroccQ8CJ40 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CroccQ8CJ40 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CroccQ8CJ40 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CroccQ8CJ40 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.3■■□□□ 1.16
CroccQ8CJ40 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CroccQ8CJ40 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CroccQ8CJ40 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CroccQ8CJ40 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CroccQ8CJ40 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CroccQ8CJ40 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CroccQ8CJ40 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.27■■□□□ 1.16
CroccQ8CJ40 Gm37136-201ENSMUST00000194368 194 ntBASIC22.27■■□□□ 1.16
CroccQ8CJ40 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CroccQ8CJ40 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CroccQ8CJ40 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CroccQ8CJ40 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.26■■□□□ 1.15
CroccQ8CJ40 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CroccQ8CJ40 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CroccQ8CJ40 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CroccQ8CJ40 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CroccQ8CJ40 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
CroccQ8CJ40 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CroccQ8CJ40 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CroccQ8CJ40 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CroccQ8CJ40 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CroccQ8CJ40 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CroccQ8CJ40 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CroccQ8CJ40 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CroccQ8CJ40 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CroccQ8CJ40 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CroccQ8CJ40 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CroccQ8CJ40 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CroccQ8CJ40 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CroccQ8CJ40 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CroccQ8CJ40 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CroccQ8CJ40 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.19■■□□□ 1.14
CroccQ8CJ40 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CroccQ8CJ40 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CroccQ8CJ40 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CroccQ8CJ40 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.18■■□□□ 1.14
CroccQ8CJ40 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CroccQ8CJ40 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.18■■□□□ 1.14
CroccQ8CJ40 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CroccQ8CJ40 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CroccQ8CJ40 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CroccQ8CJ40 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.17■■□□□ 1.14
CroccQ8CJ40 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.17■■□□□ 1.14
CroccQ8CJ40 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CroccQ8CJ40 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CroccQ8CJ40 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CroccQ8CJ40 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.17■■□□□ 1.14
CroccQ8CJ40 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CroccQ8CJ40 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CroccQ8CJ40 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CroccQ8CJ40 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CroccQ8CJ40 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.16■■□□□ 1.14
CroccQ8CJ40 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.15■■□□□ 1.14
CroccQ8CJ40 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CroccQ8CJ40 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CroccQ8CJ40 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms