Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.8■■□□□ 1.24
Rdh1Q8CGV4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rdh1Q8CGV4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.79■■□□□ 1.24
Rdh1Q8CGV4 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.78■■□□□ 1.24
Rdh1Q8CGV4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rdh1Q8CGV4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rdh1Q8CGV4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Rdh1Q8CGV4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rdh1Q8CGV4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rdh1Q8CGV4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rdh1Q8CGV4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Rdh1Q8CGV4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Rdh1Q8CGV4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.76■■□□□ 1.23
Rdh1Q8CGV4 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.75■■□□□ 1.23
Rdh1Q8CGV4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.75■■□□□ 1.23
Rdh1Q8CGV4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rdh1Q8CGV4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.74■■□□□ 1.23
Rdh1Q8CGV4 Scarna2-201ENSMUST00000157560 414 ntBASIC22.74■■□□□ 1.23
Rdh1Q8CGV4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rdh1Q8CGV4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rdh1Q8CGV4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rdh1Q8CGV4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rdh1Q8CGV4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.73■■□□□ 1.23
Rdh1Q8CGV4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Rdh1Q8CGV4 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.72■■□□□ 1.23
Rdh1Q8CGV4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rdh1Q8CGV4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Rdh1Q8CGV4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rdh1Q8CGV4 Gm9806-201ENSMUST00000051080 552 ntBASIC22.7■■□□□ 1.22
Rdh1Q8CGV4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Rdh1Q8CGV4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rdh1Q8CGV4 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.69■■□□□ 1.22
Rdh1Q8CGV4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rdh1Q8CGV4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Rdh1Q8CGV4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rdh1Q8CGV4 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.67■■□□□ 1.22
Rdh1Q8CGV4 Gm11687-201ENSMUST00000118911 886 ntBASIC22.67■■□□□ 1.22
Rdh1Q8CGV4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rdh1Q8CGV4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rdh1Q8CGV4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.66■■□□□ 1.22
Rdh1Q8CGV4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rdh1Q8CGV4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Rdh1Q8CGV4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.65■■□□□ 1.22
Rdh1Q8CGV4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rdh1Q8CGV4 Gm16437-201ENSMUST00000025669 507 ntBASIC22.65■■□□□ 1.22
Rdh1Q8CGV4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rdh1Q8CGV4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rdh1Q8CGV4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Rdh1Q8CGV4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Rdh1Q8CGV4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rdh1Q8CGV4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rdh1Q8CGV4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rdh1Q8CGV4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rdh1Q8CGV4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rdh1Q8CGV4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Rdh1Q8CGV4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Rdh1Q8CGV4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Rdh1Q8CGV4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rdh1Q8CGV4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rdh1Q8CGV4 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Rdh1Q8CGV4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Rdh1Q8CGV4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Rdh1Q8CGV4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rdh1Q8CGV4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.59■■□□□ 1.21
Rdh1Q8CGV4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Rdh1Q8CGV4 Gm9812-201ENSMUST00000061934 968 ntBASIC22.59■■□□□ 1.21
Rdh1Q8CGV4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rdh1Q8CGV4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.58■■□□□ 1.21
Rdh1Q8CGV4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rdh1Q8CGV4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rdh1Q8CGV4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.57■■□□□ 1.2
Rdh1Q8CGV4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rdh1Q8CGV4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Rdh1Q8CGV4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
Rdh1Q8CGV4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rdh1Q8CGV4 Cap2-205ENSMUST00000225824 1634 ntBASIC22.56■■□□□ 1.2
Rdh1Q8CGV4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rdh1Q8CGV4 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.55■■□□□ 1.2
Rdh1Q8CGV4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rdh1Q8CGV4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.55■■□□□ 1.2
Rdh1Q8CGV4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Rdh1Q8CGV4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rdh1Q8CGV4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rdh1Q8CGV4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rdh1Q8CGV4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rdh1Q8CGV4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rdh1Q8CGV4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rdh1Q8CGV4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.52■■□□□ 1.2
Rdh1Q8CGV4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rdh1Q8CGV4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rdh1Q8CGV4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.52■■□□□ 1.19
Rdh1Q8CGV4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Rdh1Q8CGV4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms